KEGG   Malus sylvestris (European crab apple): 126589949
Entry
126589949         CDS       T09027                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126589949
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msyl01009]
    126589949
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126589949
Enzymes [BR:msyl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     126589949
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     126589949
Protein phosphatases and associated proteins [BR:msyl01009]
 HAD phosphatases
  Other HAD phosphatases
   126589949
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     126589949
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase_6
Other DBs
NCBI-GeneID: 126589949
NCBI-ProteinID: XP_050111357
LinkDB
Position
11:36161677..36168192
AA seq 400 aa
MLTIPTRNSIFTHLIPFLPKNPNSPKPSPTRFVNFHTPKRFACIGLDTPPMSASSSTKLA
AEYAKSKRSSCKKCSEPIAAQALRLGLVSRDPKGFDVTKWHHLDCFNFRSDLVASVEKIK
GFQSLKCSDQEALKKLVGASHESREEDTNESKYAIEGKQGSHGKRVCEVDENENEIEERS
PKKAKSSKFDGQAKLEISLSISDVKDKYKDATLSPKWKAFQTIIFLERDEGLHDSSKIAA
FDFDGCLANTNVKRVGPDAWSLMYPSIPDKLQSLYKDGYKLVIFTNESNIERWKNKRQVA
VDSKIGRLNNFIGQVRVPIQVFIACGLGKVGKAEDPFRKPKPGMWHILEQHFNSGISIDM
DQSFYVGDAAGRQKDHSDADIKFAEAVGVKFYVPEEYFGV
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctaaccatacccacccgcaactctatcttcacccacctgattcccttcctccccaaa
aaccctaattccccgaaaccctctccgacacgtttcgtcaatttccacaccccgaaacgt
ttcgcttgtatcggcctcgacacaccaccaatgtcggcttcttcttcgaccaaattggcg
gcggagtacgcgaagtcgaagaggtcatcgtgcaaaaagtgctcggaaccgatcgccgcc
caggctctgcggctggggttggtcagcagagaccctaaaggtttcgatgtgaccaaatgg
caccatttggattgcttcaattttaggtccgacttggttgcttcggttgagaagattaaa
gggtttcagtctttgaagtgcagtgatcaggaggctttgaagaagttagtgggtgcgtca
catgaatctcgagaggaggatacaaatgaaagtaaatatgcaattgaaggaaagcaaggt
tctcatggaaaaagggtttgtgaagttgatgaaaatgaaaatgaaatagaggaaaggagt
ccgaagaaagcaaagtcctctaaatttgatggacaagctaagctggaaatatccctttca
atttctgatgtgaaagacaagtacaaggatgcaactctttcacctaaatggaaagcattt
caaacaatcatatttcttgaacgggatgaaggtctacatgattcgagtaaaattgctgct
tttgattttgatggatgtcttgccaacactaatgtaaagagagtaggtcctgatgcttgg
tctcttatgtatccttcaatacctgataagctgcagagcctgtacaaagatggctacaag
ctggtaatctttacgaatgaatccaacatagagcgctggaagaataagagacaagtagct
gtggactcaaaaattgggcgcctcaacaattttattgggcaagtaagggtcccaattcag
gttttcatagcttgtggcctaggcaaagttggtaaagcagaagacccctttcgcaagccc
aaacctgggatgtggcatattttggaacaacacttcaactctggcatttccatcgacatg
gatcaatccttttatgttggtgatgcagccgggagacaaaaggatcatagtgatgctgat
attaaatttgcggaggccgttggtgttaagttttacgtcccagaggaatactttggtgtt
tga

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