Malus sylvestris (European crab apple): 126590027
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Entry
126590027 CDS
T09027
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00541
Biosynthesis of various nucleotide sugars
msyl01100
Metabolic pathways
msyl01250
Biosynthesis of nucleotide sugars
Module
msyl_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
126590027
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
126590027
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
NmrA
DUF7381
Motif
Other DBs
NCBI-GeneID:
126590027
NCBI-ProteinID:
XP_050111459
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Position
11:complement(37044674..37048080)
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AA seq
668 aa
AA seq
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MGSYTPKNILITGAAGFIASHVANRLIRSYPGYKIVVLDKLDYCSNLKNLLPSKSSPNFK
FVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLFCEDVAEAFELILH
KGEIGHVYNIGTKRERRVIDVAKDICRLFSIDPETNIKFVENRPFNDQRYFLDDEKLKIL
GWSERTQWQDGLKKTIEWYTQNPNWWGDVSGALLPHPRMLMMPGGIERLSEESEEGKSES
FVSSNPRMLVPPSKASGSPRKPPYKFLIYGRTGWIGGVLGKLCEKQGIPYEYGKGRLEDG
SSLLADIQNVKPTHVFNAAGLTGRPNVDWCESHKAETIRVNVAGTLTLADVCREHGLLMM
NYATGCIFEYDAKHPEGSGIGFKEEDTPNFHGSYYSKTKAMVEELLKEFNNVCTLRVRMP
ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELIPISIEMAKRNLRGIWNFTNPGVVSH
NEILEMYKQYIDPKFTWANFTLEEQAKVIVAARSNNEMDASKLKKEFPELLPIKESLIKY
VFEPNKKV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatacacccccaagaacatcctcataactggggctgctggcttcatcgcatct
catgttgccaaccggctcatccgcagttaccctggctacaagattgttgtgcttgacaag
cttgactattgttcaaatctgaaaaacctccttccctccaaatcatcacccaatttcaag
tttgttaagggggacattgccagtgctgaccttgtcaactatctcctcatcactgagtcg
attgataccataatgcattttgctgcccagacccatgtcgacaactcctttggtaacagc
tttgagttcacaaagaacaacatctatggcacccatgttctcctagaagcatgcaaagtt
actggacaaatcaagaggttcatccatgtcagcacagatgaggtctatggtgagactgat
gaagatgctgttgtgggaaaccatgaagcatctcaacttctcccaacaaatccatactcc
gcaacaaaagcgggagcggaaatgcttgttatggcatatggcagatcatatggattgcct
gttataactacccgtggaaacaatgtctatggaccaaatcaatttcctgaaaaattgatt
ccgaagttcattctgttggccatgcaagggaagcctctgcccattcacggggatggttct
aacgtgagaagctatctattttgtgaggatgttgctgaggcttttgagctcattcttcac
aaaggagagattggacatgtgtacaatattggaacaaagagggaaaggagagttatcgat
gtggccaaagatatatgcagacttttctcaattgacccggagacaaacatcaagtttgtt
gaaaacagacctttcaatgatcagaggtatttcctagatgatgagaagctgaagattttg
gggtggtcagagcgcacccagtggcaagatgggttgaagaagactatagaatggtacact
cagaatcctaattggtggggtgatgtatctggggctctgctacctcatcctcgaatgctg
atgatgcctggtgggattgagagactttcggaagagtctgaagagggcaaatctgaatct
tttgtctcaagtaatccccgaatgttggttccaccttccaaagccagtggctctcctcgt
aagcctccctataagttcttgatctatggtaggactggttggattgggggtgtacttggg
aagctatgtgaaaaacaagggattccttatgaatatggaaaagggcgtcttgaggatggc
tcatcactcttggcagatattcagaatgtcaagccaacccatgtgttcaatgctgcgggt
ctgactggtagacctaatgttgattggtgcgaatctcataaggcagaaacaattcgagtc
aatgttgctggaaccttgaccttggcagatgtttgcagagagcatggactcctgatgatg
aactatgctactgggtgtatatttgaatatgatgctaaacatccagaaggttcaggaatt
gggttcaaggaagaggacacacccaatttccatggttcctactactcaaaaaccaaggcc
atggttgaggagctcttgaaagaattcaacaacgtctgcactctcagagttcggatgccc
atctcatctgacctgaacaaccctcgcaacttcattaccaagatctctcgttataacaaa
gtggtaaacattcctaacagcatgaccatcttggatgagttaatacccatttctattgag
atggcaaagcggaacttgaggggcatatggaacttcacaaaccctggtgtcgtaagccat
aatgagatcctggagatgtacaagcaatacattgacccaaagttcacatgggctaacttc
acactcgaagagcaagccaaggttatagttgcagctcgaagcaacaatgaaatggatgca
tccaagttgaagaaagagttccccgagttgctgccaatcaaggagtcgctgatcaagtac
gtctttgaaccaaacaagaaggtgtaa
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