Malus sylvestris (European crab apple): 126590133
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Entry
126590133 CDS
T09027
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126590133
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
126590133
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_14
AAA_23
AAA_22
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_27
VapE-like_dom
DUF5906
AAA_30
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
126590133
NCBI-ProteinID:
XP_050111612
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Position
11:complement(12934749..12940021)
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAADNGADKLANGVGSMHISDRNCTG
VLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGLRE
LPIPDHMDIYHLSREIEASDMSSLEAVISCDEERIKLEKEVEELAAQDDGGGEQLERIYE
RLEALDAATAEKRAAEILYGLGFDKQMQAKKTRDFSGGWRMRIALARALFINPTILLLDE
PTNHLDLEACVWLEEMLKNFERILVVISHSQDFLNGVCTNIIHMQNKKLKIYTGNYDQYV
QTRSELEENQMKQYKWEQEQISNMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VARDRVLIFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAG
KSTLLKLMTGELFPSDGMVRRHNHLRIAQFHQHLAEKLDMELSALAYMIKEYPGNEEEKM
RAAIGRFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPQLLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTKWNGDIMDFKQHLKIKAGLAD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacgcgagcaagaagaaggcggcgcagaagaaggcggcggcggcggcaaag
agaggtgggaaggcggcggcggcagctgcttcgtcaaaggcggctgcggccgacaacgga
gccgataagctggccaacggagtcgggtcgatgcatatctcggatcggaattgcaccggc
gtgctctgctcgcatccactttctagagatatccgcattgagtctctgtcagttaccttc
catgggcatgatctgatagttgattctgaactggagcttaattacggaagacgctatggt
ttgcttgggttgaatgggtgtggtaaatccaccctcctaactgccatagggctccgagag
cttccaattccggatcacatggatatctatcatctcagcagggaaattgaagcttcagac
atgtcttcacttgaggctgtcattagctgcgatgaggagaggataaagttggagaaagaa
gttgaagaactggcagctcaggatgatggcggtggagagcagcttgaacgcatttatgag
cgccttgaagcattggatgcagcaactgcagagaagcgtgctgctgaaattctttatggt
cttgggtttgacaagcagatgcaagcgaagaaaactcgggatttttctggtgggtggaga
atgaggattgcacttgcacgtgctctttttataaacccaaccatcttgttgcttgatgag
cccaccaatcatcttgatctagaagcttgtgtgtggttggaggagatgttgaagaatttt
gagcgaatcctggttgttatttcacactcccaggacttcttgaatggtgtctgcacaaac
atcatccacatgcagaacaagaaattgaagatctacactggaaactatgatcagtatgtt
cagacccgttctgaactggaggagaaccagatgaagcagtataagtgggagcaggaacag
atttctaacatgaaggaatatattgctcggtttgggcatgggtcagcaaaacttgctcgc
caggcgcagagcaaagagaaaaccctagcaaaaatggagcgcggtgggcttacagaaaag
gtggcaagagacagggttctgatcttccgttttgtcgacgtgggaaagctgccgccacca
gttcttcagtttgttgaagtctcatttggttacactccagataatctgatctacaagaac
atcgactttggtgttgatctggactcgcgtatagctctggttgggccaaatggagctgga
aagagtactctcttgaagctgatgacgggggagttgtttccttctgatggcatggtccgg
cggcacaatcaccttagaattgcccagttccatcagcacttggctgagaagcttgatatg
gaactgtctgccctagcgtatatgatcaaagagtacccaggaaatgaggaagagaagatg
agggctgcaatcggtaggtttggactctcgggcaaggcacaagtaatgccaatgaagaat
ttatctgacgggcagaggagccgtgtgatctttgcttggttggcgtttaggcagccccag
ttactgttattggatgagccaacaaatcatttggatatcgagacaatcgactcgctggcg
gaggcattgaatgagtgggatgggggtctggttcttgttagccacgatttcaggctcata
aaccaggtagctcaggagatatgggtgtgcgaaaatcaagccgtgaccaagtggaatggc
gatatcatggacttcaagcagcacctgaagataaaagccggtttagccgattga
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