Malus sylvestris (European crab apple): 126590141
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Entry
126590141 CDS
T09027
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126590141
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126590141
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Zn_ribbon_Elf1
HVO_0758
DUF2250
Motif
Other DBs
NCBI-GeneID:
126590141
NCBI-ProteinID:
XP_050111657
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Position
1:24599613..24601858
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AA seq
379 aa
AA seq
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MEKDLLELFDAVKKSADAATSCDGGAEESECLEAFEQLNNFPVTHQILVSTQVGKRLRHL
TKHPRKKIQSVASGLLEKWKEIVMSEVGKNVKNGNLERIDSLKRDSPRADSPRPEKVQKT
SAVKVEKVSKAEPVEVKKVDRDVKPSSEKAYSSGTVKAERKVQNVNPVKTEKAASVENVK
DEKVAKDVKKPALNSSGPPKLTSMIKCNDTARDKVRVLLHEALSKVSEEGDERFVDEVNA
ADPIRVAVTVESVLFENWGGSTGSQKAKYRSLIFNLKDQKNPDFRRKVLLGHIEAERLVD
LSTAEMASDQRQEENQKLEQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQMQTRSAD
EPMTTYVTCVNCNNRWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatcttctggagctgttcgacgccgtgaagaaatcggcggacgccgccaca
tcttgcgacggaggagccgaggaaagcgaatgccttgaggccttcgagcagctcaataat
tttcccgtcactcatcaaatccttgtctcaacccaagttggaaagcgtcttcgacatctc
acaaaacatcctagaaaaaaaatacaatcggttgcttcaggccttttggagaaatggaaa
gagattgttatgagcgaggtagggaaaaatgtgaaaaatggaaacttggaaagaatagac
tctctaaaacgtgattctccacgtgccgacagccccaggcctgagaaggttcagaagaca
tctgctgtgaaggttgagaaggtttccaaggctgaacctgttgaggttaagaaggttgat
cgtgatgtcaaaccaagctctgagaaagcttatagttccggaactgtcaaagcagaaaga
aaggttcaaaatgttaatcctgtcaagactgagaaagctgcttcagtggagaatgtgaag
gatgaaaaggtagccaaagacgtgaagaaaccagcactgaactcttctggtcccccaaag
ttaacctctatgattaagtgtaatgatacagctcgggacaaagtgagggtactgctgcat
gaggctttgtccaaggtttctgaggagggtgatgaaaggtttgtggatgaggtgaatgca
gctgatcctattcgagttgctgtcactgtggaatctgtgctgtttgagaactggggtggt
tccaccggctcccagaaggctaagtatcgatctttgattttcaacctgaaggaccaaaag
aatccagatttccgcagaaaagttctgcttggacatatcgaggcagagaggctcgtggac
ctgtcaacagcggaaatggcaagtgatcagaggcaagaggagaaccaaaagcttgaacaa
aaagcattgtttgagtgcgagcgtggaggtgcaccaaaagccacaaccgatcaattcaaa
tgcggtcgatgtggacagcgcaagaccacttactaccaaatgcagacccggagtgcggat
gaacctatgacaacgtatgtaacatgtgtaaactgcaataatcgttggaagttctgttag
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