Malus sylvestris (European crab apple): 126590181
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Entry
126590181 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126590181
KO
K27753
GRAS family protein LISCL
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126590181
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Other transcription factors
GRAS
126590181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
KDM5_C-hel
Motif
Other DBs
NCBI-GeneID:
126590181
NCBI-ProteinID:
XP_050111666
LinkDB
All DBs
Position
11:complement(8134856..8144628)
Genome browser
AA seq
1609 aa
AA seq
DB search
MDPSSYQLPNSNSNFIDQTLSPNFNEYPSSDPFVDLSFLGQNPSNSALSPSLSPDGDDSD
YSDSVLRYINQVLMEEDMETKPCMFHDPLAVQAAEKSLFEVLGGKFPPSPNQHPLNFESP
DGRSSATFSDHSGNNSSSLSSSTSHLDDSRSSVDVIEHKPSILQNPIPENFVFQSKAKSQ
FSSNGNGLVGSYVSEPMVSNLFRERELVLQFNRGVEEASKFLPRGQLIVNVENNKPYTVA
NGKAENVVVKTEKDEGEYFPTSSRGKKSHEREDADLEVGRSTKQSAVYEETEADLSEIFD
KVLVCGEGNPKPIVSEGEEVCLDEANKALQQSGQSVGTSNGKTRAKKKGDKKEVIDLRTL
LISCAQAVSSDDRRTANELLKQIRQHSSPFGDSSQRLAHCFANGLEARLAGTGTQIYTAL
SSKRTSAADMLKAYQTYFEACPFMKVAIIFANHTISKLAEKAETLHIIDFGILYGFQWPA
LIRCLSRRAGGPPKLRITGIELPQSGFRPEERVQETGHRLAKYCERYNVPFEYNGIAKKW
EAIQYEELKVKRDEVLAVNCLFRFKNLLDETVVVNSPRDTVLNFIRSMNPDIFIHSVING
SYNAPFFVTRFREALFHFSAMFDMFDTNLSREDQMRLMFEEEFLGREVVNTVACEGSERV
VRPETYKQWQARNMRAGFKQLPLNRELMNKLRAKVKLGYHRDFMVDEDGNWMLQGWKGRI
LYSSSCWVPSRSASVVLYRCKNSAVFCNHRAVWVTMYWFLIVESNRQINAIFTFMEYAPE
DLRVLEFRIVPRYFSVIVMDHPTVNGSPDYLNGFSIDDLAFTPHSTQFSNLTNEYQFNQF
SPDLNFVDNHFSLPPDFEQGNIVPKVSLTTSGESSVPSNSLNPPDGGSLSLPTAVSVGGV
DSSSDDSDFSEAVFKYVNQILLEENIEKKPCMFFDPLGLRVTEKSFYDVLGQRYPFSPNQ
QPLHINPNVESPGGNNSGSCSDCSGSNNSPSPGTSNSNDPQRVGDSGDPKSSFPQTTLPS
DNPFQFNSHSSSQLSVPLENRMTSVGDRRHVGGGQRLDDMLRGSSVEEFVAQNIYTDSDS
ILQFQRGLEEASKFLPKSTQLLVDLESKTVSPEVKASVPMVTVKKEKSERKNSRNGSKGR
KNREREDVDLEEGRSSKQSAVYIEKTEESELSEMFDKVLLSTGGNNESQCDNVAFKNESS
KTLQPSGQPQGSNGNGGKARGKKQGKKKETVDLRNLLILCAQAVSTNDFRTTSELLKQVR
QHASPNGDGSQRLAHFFANGLEARMGGTDTGTQKFYTSLVKRSSAVDMLKSYQVHLSACP
FKRMCVLFKNKMILKMAEKATTLHIVDFGILYGFQWPFLIQHLSKRRGGPPKLRITGIEV
PQPGFRPAEWIEETGRRLARYCERFNVPFEYNAIASQDWESIQLEDLKTERNEVLAVNCM
LRFKNLLDETVEVNCPRDGVLQLIRRMKPDIFVHSIINGSYNAPFFVTRFREALFHYSSL
YDAFDINIPRDNEERLRFESEFYGREAMNVIACEGIERVERPETYKQWQVRCMRAGLQPL
QLDQDLVKILKDKVKAWYHKDFVVDQDSDWMLQGWKGRIVYASSCWVPA
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagttcttatcaactgcccaattccaattccaatttcatcgaccagacactt
tcccccaatttcaatgagtacccaagcagcgatccctttgtggatcttagctttctgggc
caaaatcctagcaactctgctctgtctccgagcttgagccccgacggggatgacagtgac
tactctgacagtgtgctcaggtacataaaccaggtgttaatggaggaggatatggagaca
aagccctgtatgtttcatgaccctttggctgtccaagccgctgagaaatctctctttgag
gttcttggtgggaagtttccaccttctccgaatcagcatccgcttaattttgagagccct
gatggtcgttcttctgcaacttttagtgatcatagtggaaataatagctctagtcttagt
tctagtactagccatttggatgattctcggagtagcgttgatgttattgagcataagccc
tctattttgcaaaacccaattccggaaaactttgttttccagtcaaaggccaagtctcag
ttttcgtcgaatgggaatggattggtgggttcttatgtgagtgagcctatggtttctaat
ttgtttagggagagggaattggtgttacagtttaacagaggggtagaggaggctagtaag
tttcttcctagaggtcaactgattgttaacgttgagaataacaagccgtacacagtggcg
aatggaaaggctgaaaatgtggtggttaagacggagaaggatgaaggcgagtattttcct
actagttcgagaggaaagaagagtcatgagagggaagatgcagatttggaggttgggagg
agtaccaagcaatcagctgtttatgaggagacagaggctgatctatcggagatttttgat
aaggtgcttgtttgtggtgaggggaatcccaagcctattgtgagtgaaggtgaagaagtc
tgtctggatgaagcaaacaaggctctgcagcagagtgggcaatctgttggaactagtaat
ggaaagactcgtgccaagaaaaagggcgacaagaaggaagtgatagatttgaggactcta
ctcatttcatgtgcacaagctgtttcttctgatgatcgtaggactgctaatgagctacta
aagcagattaggcagcactcttccccatttggcgatagctcgcagaggttggctcattgc
tttgcaaatggccttgaagcacggttggctggcactggaactcagatatatactgctcta
tcttctaaaagaacgtcagctgctgatatgctgaaggcttaccaaacttattttgaagcc
tgcccgttcatgaaggtcgcgataatcttcgcaaaccacacgatttcaaaattagctgag
aaagcagaaacactgcatattatagattttggaatcctctacggttttcaatggcctgct
ctcattcgttgcctctcaagaagagctggtggacctccaaaactacgcattacagggata
gagcttccccaaagtggttttcgacctgaagaaagagtccaagagacagggcatcgtttg
gcaaagtattgtgagcggtataatgttcctttcgagtacaatggcatagcaaagaaatgg
gaagctatccaatatgaggaactcaaagtcaagagagatgaagtgcttgctgtgaattgt
ctgttccggtttaaaaacctacttgacgagacagttgtggtaaacagcccaagggatact
gttctaaatttcattaggagcatgaatcctgatatctttatccatagtgtcattaatgga
tcttacaatgccccattcttcgtcacacgcttcagggaggctctattccacttctctgca
atgtttgatatgtttgataccaatttatctcgtgaggatcagatgagattgatgtttgag
gaagagttccttggacgagaggttgtaaacacagtagcttgcgagggctctgagagagtt
gtgaggcctgagacatataagcagtggcaggctcggaacatgagggctgggttcaaacaa
ttgccattgaaccgtgaactcatgaacaaattaagggccaaggtgaaactggggtaccac
cgtgatttcatggttgatgaagatggaaactggatgctgcaaggatggaagggcagaatt
ctctacagttcctcctgttgggtaccgtctaggtctgcttctgtagttctatacagatgt
aaaaatagtgctgtattttgcaatcaccgtgctgtctgggtgacaatgtactggtttctt
atcgttgaatctaatcgtcaaataaacgcaatttttacttttatggaatatgccccggag
gatttgagggttttagagtttagaattgtacccaggtatttttctgtgatcgttatggat
catccaactgtcaatggaagtcctgattacttgaatggtttcagtattgatgatctagcc
ttcacaccccattcaactcaattctcaaatctcacaaatgaataccaatttaaccagttc
tctccggatcttaactttgtggacaatcatttttcccttccgcccgatttcgaacagggt
aatattgttcctaaagtcagtttgaccacaagtggagagtcatctgttccatctaatagt
ttgaatccacctgatggaggctcattgtctctgcctacggctgtgagcgtcggaggagta
gacagttcctccgatgacagtgatttctctgaagctgttttcaaatacgtaaaccagatt
cttttggaagagaacatagagaaaaagccttgcatgttctttgatccgttgggtcttcgt
gtgactgagaaatcgttctatgatgttctgggtcaacggtaccccttttcacccaatcag
caaccacttcatatcaatccgaatgttgagagtcccggtggtaataattctgggagttgt
agtgattgtagtggtagtaataatagtcctagtcctggtactagcaattccaatgatcct
caacgggttggcgattcgggagatccaaaatcttcttttccacaaactacccttcccagt
gacaaccctttccagttcaattcacattcgagttcacagttgtctgttcctctggaaaat
cgcatgactagtgttggtgataggcggcatgttggtggtgggcagcgccttgatgatatg
ctacggggctcctctgtagaagagtttgtggctcagaatatatatacagatagtgattct
atcttgcaattccagagagggttagaggaagctagtaaattccttccgaaaagcactcag
ctgcttgttgatctggaaagcaagacagtgtctccagaagtgaaagcaagtgtgccgatg
gttactgtcaagaaagaaaagagtgagcggaagaactcacgtaatgggtcaaagggaaga
aagaatcgcgagcgggaagatgttgatcttgaagaagggaggagtagcaagcagtctgca
gtttatatagaaaagactgaagagagtgaattgtctgagatgtttgacaaggtgttgctg
tctactggcggaaataatgaatctcagtgtgacaatgttgcttttaagaatgaatcaagc
aagaccttgcagccaagtggacagccacaaggatctaatggtaatggcgggaaggctcgt
ggtaagaaacaaggaaagaagaaggaaactgtggatttgcggaatctcctgattttatgt
gcacaagccgtgtctaccaatgattttaggaccactagtgaactgttaaagcaggttagg
cagcacgcttctcctaacggtgatggatctcaaaggttggctcacttctttgcgaatggt
cttgaggctcgtatgggtggtactgacaccggaacccaaaagttttatacgtcccttgtc
aaaaggtcatcagccgttgatatgttgaaatcttaccaagttcatctttcagcttgccct
ttcaagagaatgtgtgtgctcttcaaaaacaagatgattttgaagatggctgagaaagca
acaacccttcatattgtcgatttcggtatcctgtatggtttccagtggccattcctcatc
cagcatctttcaaagagacgtggtggacctccgaagctacgcattaccgggatagaggtt
ccccaacctgggtttcgtccggcagagtggattgaagagactggacgtcgcttggcaaga
tattgtgagcgttttaatgtaccttttgagtacaatgctatagcttcacaagattgggaa
tccatccaactggaggaccttaagactgaaaggaatgaggtgcttgctgtgaactgtatg
ttacggttcaagaacctacttgatgagaccgttgaagtgaactgtccaagggatggtgtt
ctacaactaatcagaaggatgaaaccagatatttttgtccactctattatcaatggttcc
tacaatgcccctttctttgtcactcgatttcgggaggctctcttccactactcttccttg
tatgatgcatttgatattaatataccccgtgacaatgaagagaggttgaggtttgagagt
gagttctatggcagggaagctatgaatgtaatagcatgtgagggcatcgagcgggttgag
aggcctgagacatataagcagtggcaggttcgatgcatgagggctggtttacagccgttg
caattggaccaagatttagtgaagattcttaaggataaggtgaaggcatggtaccacaaa
gattttgtagttgatcaagatagtgattggatgcttcaaggatggaagggccgaattgtg
tatgcttcttcttgttgggtgccagcgtag
DBGET
integrated database retrieval system
