KEGG   Malus sylvestris (European crab apple): 126590399
Entry
126590399         CDS       T09027                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126590399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126590399
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    126590399
 Complex B
    126590399
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 126590399
NCBI-ProteinID: XP_050111823
LinkDB
Position
2:complement(11427282..11432515)
AA seq 602 aa
MMTEYEGRYDGNGEDAGTYADGGSSPQPRAAVHGGADDYSDSKSQVHVVLRHESRDYERE
SSKSREKDRDKGRDKERDRDRDRDRDRGRSKDKDRERDRDRDRVRDRDRDRERERDRDRD
RDRHHRDRHRDRERSERRRDKDDDDDGHYRTRDSDRRRDYDRDREDRHRRKSRSRSRARS
EHKSRSRSRSRSRSKSKRISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPL
STGQQFAPLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP
GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP
SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGFDLVKD
RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA
QQQIALQRFMLLQPPSSVATKVVCLTQVVTADELRDDTEYDDILEDMRLEGEKFGALVNV
IIPRPRPDGELAPGVGKVFLEYADTDGSTKARTGLNGRKFGGNQVVAVFYPEDKFGQRDY
EG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgatgacggaatacgaagggaggtacgatggtaacggagaggacgctggcacctacgcc
gacggcggttcctctccccaacctcgtgctgccgtccacggcggtgccgacgattacagc
gattccaaatctcaggtacacgtagtattgcggcatgagtctcgtgattacgagagagaa
tcttcaaagagcagagaaaaggatagagataaagggcgtgataaggagagggacagggac
cgggacagagatagagacagggggagaagcaaggacaaggatagggaaagggatagggat
agagatagggttagggatagggatcgtgatagagaaagagaaagagaccgggacagggat
cgcgatcgtcatcacagagaccgccacagggatcgcgagagaagtgagcgacggagagac
aaggacgacgatgatgatggtcactaccgtacccgggactctgatagacggagggattat
gacagagacagggaggataggcataggcgcaagtcccggtctcgttcaagagctagatct
gagcacaaatccagatcgaggtcacgctctcgttcacgctcaaaaagcaaaaggattagc
ggttttgacatggcacctcctgcttctgcaatgttagctggtgctgctgttgctgcagca
gggcaaattcctgggactagtcctaccattccgggaatgttcccaaacatgttccctctg
tcgaccggtcagcagtttgcaccccttccagttatgcctgttcaggcaatgactcaacag
gctactaggcatgcccgacgagtgtatgttggagggcttcctcccacagcaaatgaacag
tctgttgctacatttttcagccaagttatggctgcaattggagggaacactgctggccca
ggagatgctgttgtcaatgtctacataaaccatgaaaagaaatttgcttttgtggagatg
agatcggttgaagaggctagcaatgcaatggctctggatggaattatttttgagggagcc
cctgttaaggtgcggagacctagtgattacaacccatctctggctgcaacactcggtcca
agccagcccaatcccaacctgaacctggccgctgtggggcttacaccgggttctgctggt
gggcttgagggccctgaccgcatatttgttggtgggctgccatattacttcacagaagca
cagatcaaggagttactcgaatcctttggaccccttcgtggttttgatttagtgaaagac
agggaaacaggaaactcaaaaggctatgccttttgtgtttaccaagacctttctgttaca
gacatagcttgtgcagcgctgaatggtattaaaatgggtgacaagacgctcacagttagg
cgtgctaaccaaggtgccaaccagcccaaacctgagcaagagagcgttctgttgcacgca
cagcagcaaattgcattgcagaggttcatgctgttgcaaccgcctagttctgttgccacc
aaggttgtatgtttaactcaggtagtaactgcagatgagcttagggacgatactgagtat
gatgatatcttggaagacatgaggcttgaaggcgaaaagtttggtgcattagtgaacgtc
atcatcccgcgtccaagaccagatggtgaacttgcccccggtgttgggaaggtgtttttg
gagtacgcagatactgatggctccacaaaagcccgcacggggttgaatggccggaaattt
ggcggcaatcaggtggtagcagtgttttatccggaggacaagttcggccagcgcgactac
gagggctag

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