Malus sylvestris (European crab apple): 126590530
Help
Entry
126590530 CDS
T09027
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic-like
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00900
Terpenoid backbone biosynthesis
msyl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126590530
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126590530
Enzymes [BR:
msyl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
126590530
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
126590530
Prenyltransferases [BR:
msyl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126590530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
126590530
NCBI-ProteinID:
XP_050111933
LinkDB
All DBs
Position
11:37408023..37411976
Genome browser
AA seq
423 aa
AA seq
DB search
MMSMTCHTLDARAVMDFVACGCSSNALLDRYSVRNYSKANPKGSCRGYGARRNRIRCGVS
SMTTAETPIPKKADNALLNGAPEGLPQVLNLKKESRKPVSLTNLFEIVADDLLTLNQNLQ
SIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAELVGLKELTKEHRRLAEIIEMI
HTASLIHDDVLDESDMRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIQVIKLIS
QVIKDFASGEIKQASSLFDCDVELEEYLLKSYYKTASLIAASTKGAAIFSGVDNYVMEKM
YDYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALKKEPKLRDIIES
EFSETGSLDEAIALVKACGGIEQAQELAKEKAHLAIQNLECLPKTAFRLALEDMVMFNLQ
RID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaatgacatgccacactcttgatgcgagagctgtgatggattttgtggcttgt
gggtgttcttccaatgctttgttggaccgttattcggtgaggaattactcgaaggcgaat
cccaagggcagttgtagaggttatggagctcgtcggaatcgaattcggtgtggagtttct
tcaatgacaacagctgagactccaataccaaagaaggcagataatgctctgctgaatggt
gcgcctgaaggtcttccacaggttttaaatttaaagaaagaatccagaaagccggtttcg
ctgacaaatttgtttgaaattgttgctgatgacctcctcacattaaatcaaaatcttcag
tctattgttggtgcagaaaaccccgtcttaatgtcagctgctgagcagatctttggtgcc
ggtgggaagaggatgagacccgcattggtgtttctagtgtccagagcaacagcagaacta
gttggattgaaggaacttaccaaagagcatcggcgattggcagagatcatcgaaatgatc
catacagcaagcttgatacatgatgatgttttggatgaaagtgacatgcgacgagggaag
gaaactgttcatcaaatgttcggtacaagagtggcagtgcttgctggggacttcatgttt
gcacagtcatcatggtatcttgcaaatctagaaaacattcaggtcatcaagctcatcagc
caggttatcaaagattttgcaagtggtgaaataaagcaggcatctagcttgtttgattgt
gacgtcgaacttgaggagtacttgcttaagagctactacaaaacagcctccttaatcgct
gcaagtaccaaaggagctgccatttttagtggggttgacaactatgtaatggagaaaatg
tacgactatggcaagaatcttgggctgtccttccaagttgttgatgacatattggatttc
acacagtcggcggagcagctggggaagcctgctggaactgaccttgccaaaggaaacctg
acagccccggttatatttgctttgaagaaagaaccaaaactaagagacataattgaatca
gaattcagcgagactggttccctcgacgaagccattgcattggttaaggcttgtgggggg
attgaacaagcacaagaattagcgaaagagaaagctcatcttgcaatacaaaatctcgag
tgtcttcccaagactgcttttcggttagcgctggaggatatggtgatgttcaatcttcaa
cggattgattag
DBGET
integrated database retrieval system
