KEGG   Malus sylvestris (European crab apple): 126590817
Entry
126590817         CDS       T09027                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126590817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126590817
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    126590817
 Complex B
    126590817
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 126590817
NCBI-ProteinID: XP_050112283
LinkDB
Position
11:14401995..14405283
AA seq 310 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGQPIDPRQMQRHFEEFYEDLFQELSKYGDIESLNVCDNLADHMVGNVYVQFREED
HAANALRNLSGRFYAGRPIIVDYSPVTDFHEATCRQYEENTCNRGGYCNFMHLKRIGREL
RRELFGSYRRRHSRSRSRSRSPYRHRSYEERSHGSRAHSRRYDDDDRYPESWSRRNKTLS
PGRKRGRSRSRSPGRRRNHSPVREGSEERRAKIEQWNWEKEQNENASRVNTDRSNNDGHP
HMENQYNGHE
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatattcgggacggagaaggaccgagtgaactgccctttc
tacttcaaaattggggcttgcaggcacggcgaccgctgctccagactccacaccaagccc
agcgtcagccccacgctcctgctctccaacatgtaccagcggcccgatatgatcaccccc
ggcgtcgacgcccagggccagcccatcgacccccgccagatgcaaaggcacttcgaggag
ttttatgaggatctatttcaggagttgagtaagtacggcgacattgaaagtctgaatgtc
tgtgacaacctagccgaccatatggtgggcaatgtgtacgttcagtttagggaggaagat
cacgctgcaaatgcacttcggaacctgagtggaagattttatgctggtcgtcctatcatt
gttgactattcaccagtgacagacttccatgaagccacctgcaggcaatatgaggagaat
acatgcaaccgtggtggatactgcaattttatgcacctgaaaaggattggcagggaattg
aggcgtgaattatttggaagctatcggagaaggcacagccgcagtcgaagtaggagtcgc
agcccttacaggcatcgtagttacgaagagcgctctcatgggagccgtgctcatagcaga
aggtatgatgatgatgatcgttatcctgaaagctggagccggaggaacaagactctaagc
cctggtcgaaagagaggacgcagtagaagtagaagccctggaagaagaagaaaccacagt
ccagttagagaaggaagtgaggagagacgggccaaaattgagcagtggaattgggaaaaa
gaacagaatgaaaatgctagtagggtcaacactgacagaagcaacaatgatgggcatcca
catatggaaaatcagtacaatggccatgagtaa

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