Malus sylvestris (European crab apple): 126590848
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Entry
126590848 CDS
T09027
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126590848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126590848
03021 Transcription machinery [BR:
msyl03021
]
126590848
Transcription factors [BR:
msyl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
126590848
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126590848
RNA polymerase III system
TFIIIB
126590848
RNA polymerase I system
SL1/TIF-1B
126590848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
126590848
NCBI-ProteinID:
XP_050112320
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All DBs
Position
11:186919..190183
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AA seq
215 aa
AA seq
DB search
MEAQGLNQYQVNKTKGMAEEGSHPVVVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIAL
KARNSEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEEQSRLAARKYARVIQKLG
FPAKFKDFKIQNIVGSCDVKFSIRLEALVVSHCAFSSYEPEIFPGLIYRMKQPKIVLLIF
VSGKIVLTGAKARTETYEAFENIYPVLTGFRKNQH
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaaggtctcaatcagtaccaagtcaataaaacaaagggaatggcagaagaa
ggaagccatccagtagtagtagatctgagcaagcacccttctgggattgtccctactctc
cagaatattgtctccactgtcaatctggattgcaaattggatcttaaagccattgcattg
aaagctcgtaattctgaatacaacccaaagcgttttgcagctgtgatcatgagaataaga
gagccgaagaccactgccttgatatttgcgtccggtaaaatggtttgtacgggagctaag
agtgaagaacaatcgagattggcagcacgaaagtatgctcgagtcatccagaaactcggt
tttccagctaagttcaaagatttcaaaatccaaaatatagttggttcttgtgatgtaaaa
ttctccataagacttgaagccttggtagtatcccactgtgctttctccagctatgaacca
gaaatttttccaggcttgatatatcgaatgaaacaaccgaagattgtgctcctcatcttt
gtgtctggaaaaattgtcctgacaggagcgaaggcaagaaccgagacgtatgaagccttt
gagaacatttacccagttcttacaggattcaggaaaaatcagcattga
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