KEGG   Malus sylvestris (European crab apple): 126590848
Entry
126590848         CDS       T09027                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    126590848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msyl03000]
    126590848
   03021 Transcription machinery [BR:msyl03021]
    126590848
Transcription factors [BR:msyl03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    126590848
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     126590848
  RNA polymerase III system
    TFIIIB
     126590848
  RNA polymerase I system
    SL1/TIF-1B
     126590848
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 126590848
NCBI-ProteinID: XP_050112320
LinkDB
Position
11:186919..190183
AA seq 215 aa
MEAQGLNQYQVNKTKGMAEEGSHPVVVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIAL
KARNSEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEEQSRLAARKYARVIQKLG
FPAKFKDFKIQNIVGSCDVKFSIRLEALVVSHCAFSSYEPEIFPGLIYRMKQPKIVLLIF
VSGKIVLTGAKARTETYEAFENIYPVLTGFRKNQH
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaggcgcaaggtctcaatcagtaccaagtcaataaaacaaagggaatggcagaagaa
ggaagccatccagtagtagtagatctgagcaagcacccttctgggattgtccctactctc
cagaatattgtctccactgtcaatctggattgcaaattggatcttaaagccattgcattg
aaagctcgtaattctgaatacaacccaaagcgttttgcagctgtgatcatgagaataaga
gagccgaagaccactgccttgatatttgcgtccggtaaaatggtttgtacgggagctaag
agtgaagaacaatcgagattggcagcacgaaagtatgctcgagtcatccagaaactcggt
tttccagctaagttcaaagatttcaaaatccaaaatatagttggttcttgtgatgtaaaa
ttctccataagacttgaagccttggtagtatcccactgtgctttctccagctatgaacca
gaaatttttccaggcttgatatatcgaatgaaacaaccgaagattgtgctcctcatcttt
gtgtctggaaaaattgtcctgacaggagcgaaggcaagaaccgagacgtatgaagccttt
gagaacatttacccagttcttacaggattcaggaaaaatcagcattga

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