Malus sylvestris (European crab apple): 126590881
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Entry
126590881 CDS
T09027
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126590881
03036 Chromosome and associated proteins [BR:
msyl03036
]
126590881
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126590881
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
126590881
SLIK complex
126590881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
COG4_m
Motif
Other DBs
NCBI-GeneID:
126590881
NCBI-ProteinID:
XP_050112355
LinkDB
All DBs
Position
11:complement(24754864..24775381)
Genome browser
AA seq
1741 aa
AA seq
DB search
MAFFRNYSKDTVSRSVLEEKTQGKSVERIHSSTGNDDVDVKSCEKEFDINMDVQYQSEGE
HDDASRLHNEVATDEGMGTRVSNLPSSGRRTTVAGKWGSTFWKDCQPMHSQGGSDSGQET
KSGSDHRNAVGSEDNSSDVGEDRIDFEDDGRPKVSKGQRGHSDIPADEMLSDEYYEQDGE
EQSESMHYRGFHHSVGSNSRPQLKPNSVSNHAHHRTSRNDIEDFEDGDDANEDLDAADAD
YEEDEDEDDPDDADFEPDYGVGSGRTAQKDKNWNGEDSDEDNDSDDELDVSDEDDSYYGK
KPKSRHQGDAKSTRERKSYHSSSRQRRGKSSFDDDESSAEDSESDGDEDFKGIKRKGVHT
RKSNGRRNVLGQNGDVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEIEEEDGDYIEK
VLWHQPKGMAEDALRNNRSTDPILLSHLFDSEPDWNHMEFLIKWKGQSHLHCQWKSISEL
QNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQVERIIADRIR
QDSSGDVGPEYLVKWQGLSYAEATWEKDVDIGFAQDAIDEFKAREAAMAVQGKMVDLQRK
RSKGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQINGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFNNDK
IVGRPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSSIKDGSKLERIILSSGKLVILDKLLMKLHETKHRVLIFS
QMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKESKKGTLFDKNELSAILRFGAEELFKEDKNDEESKKGLLSMD
IDEILERAEKVEEKETAEEGNELLSAFKVANFGTGEDDGSFWSRWIKPEAVSQAEEALAP
RATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKSDYTVTSAPMIGGASAQVRRWSS
GNLSKRDALRVSRAVMKFGNESQIASIVGEVGGAVAAASTEAQVELFNALIDGCTEAVEV
GSLDSKGPMLDFFGVPVKAGDLLNRVRELQHLAKRISRYDDPIAQFRVLMYLKPSNWSKG
CGWNQIDDARLLIGIYYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLRDRA
NALLEMEIAALGGKNANAKVGRKSSKDRETTVNVSLARSGLKKGKTGSSRVNVQMNKDRP
LKPQKVEALVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLKRLERLQTTSANLP
KEKVLSKIRSYLQLLGRTIDQIVLENEEEPYGQDRMTMRLWKYVSTFSNLSGERLHQIYS
KLKQHQDVEAGPSHMNDSASGPFGRDSDPSPFSFPSDRQRGHDTAKFEAWKRRRRGEADS
NFQVQAPSQRNMNNGTRLTDPSSLGILGARPSENKRTVNERPYRTRQAGLPTKQGFTSRI
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaggaactattctaaagacactgtttcacgaagtgtcctcgaagaaaag
acccagggaaaaagtgttgaaagaattcacagttctacagggaatgatgatgtggatgta
aaatcttgtgaaaaggaatttgatatcaacatggatgtgcagtatcaaagtgaaggtgaa
catgatgatgctagtaggttgcacaatgaggtagcaacagatgagggtatgggtacaaga
gtttccaatttgccctcttctgggaggaggacaactgtggctggaaagtggggttcgacc
ttttggaaggactgtcagcctatgcactcacagggcgggtctgattctggtcaggaaact
aaaagtgggtcggaccacagaaatgctgttggatctgaagataattcttcagatgtcggg
gaagatagaatagattttgaagatgatggcaggccaaaggtaagcaagggacaacggggc
cattctgacatccctgcagatgaaatgttatctgatgaatattatgagcaggatggggaa
gaacagagtgaatcgatgcactatagagggtttcatcattccgttgggtcaaattctagg
ccacaattaaagcctaattcagtcagtaaccatgcacatcatagaacttctagaaatgat
attgaagattttgaagatggtgatgatgccaacgaagatcttgatgctgctgatgctgat
tatgaagaagacgaagatgaagatgatcctgatgatgcagattttgaacctgactatggt
gttgggagtggtcgcactgcacagaaggataaaaattggaatggtgaagattctgatgaa
gacaatgatagtgatgatgagcttgatgtttcagatgaagatgattcttattatggaaag
aaacctaagagtaggcatcaaggtgatgctaaatcgacaagggaacgcaaatcatatcat
tcgtctagtcgccaaagaagagggaagtcatcttttgatgatgatgagtcctcagcggag
gactctgagagtgatggtgacgaggattttaaaggtatcaaaaggaaaggtgtacatacc
cgcaaaagtaacggccgaagaaatgttcttggacaaaatggtgacgtgcgaacttctacg
aggtctgttaggaaggtctcatatgttgaaagtgatggaagcgatgaagtggaagaagga
aagaaaaagaagtcccagaaggaggagattgaagaagaggatggtgactatattgaaaag
gtgctctggcatcagcctaaaggcatggctgaagatgctctcaggaacaatagatcaacg
gatcctatcctattaagtcacttgtttgattctgagccagattggaatcatatggagttc
ttgattaaatggaaagggcagtcccatttgcactgtcagtggaaatcaatttccgagcta
caaaatcttagcggttttaagaaggttttaaattacactaaaaaggtgatggaagatgcc
aggtacaggaacacaatatcacgtgaggagattgaggttcatgatgtgagcaaggaaatg
gacttggatcttatcaagcagaatagtcaggtggagagaataattgcagaccgcatcagg
caagatagctctggtgatgtgggtccggagtatctagtcaagtggcaagggttgtcttat
gctgaagcaacatgggagaaggatgtagatattgggtttgcacaagatgctatcgatgag
ttcaaggctcgtgaagctgcaatggctgtacaagggaaaatggtggatctccagcgcaag
aggagcaaaggaagtctacggaagctcgaggaacagccggaatggttgaagggaggaaag
cttcgtgattatcagcttgagggtttgaattttcttgttaatagttggaggaatgatacc
aatgtcattttagctgatgaaatgggtcttggtaaaactgttcaatcagtttcaatgctt
ggttttttacagaatgctcaacagatcaatgggccgtttcttgttgttgtaccattatcc
actttgtctaactgggccaaagaatttaggaagtggctccctgatatgaatattattgtg
tatgttggtactcgtgcaagccgagaggtttgtcaacagtatgaatttaataatgataaa
atagtaggccggcctataaaattcaatgcactattgacgacatatgaggtggttttaaag
gataaggctgttctttccaagatcaagtggaattatctaatggttgatgaagctcataga
ttaaagaacagtgaggcacagttgtacacaaccctcttggaatttagcacgaagaacaag
ttgcttataactggtactcccttgcagaacagcgtagaggagttatgggctctgcttcac
ttccttgaccctgataagttcaagaataaagatgattttgttcagaattacaagaatctc
agttcattcaatgagattgagcttgctaatctgcatatggaattgaggcctcacattctt
cgaagagttatcaaggatgtggaaaagtctttacctcctaaaattgaacgaattcttagg
gttgaaatgtctcctcttcagaaacagtactataaatggattttggaacgcaactttcat
aacttgaacaaaggagttcgtgggaatcaggtttcgttgttgaatattgtggtagagttg
aagaaatgttgtaatcatccctttctgtttgaaagtgctgaccatggttatggtggggac
tcaagtattaaagatggcagtaaattggagaggattattttaagcagtggaaaattggtt
atacttgataagcttcttatgaaattgcatgaaacaaagcaccgtgttctcatattttcc
cagatggtaagaatgttggacatactggcggagtatatgtcaattagaggttttcaattt
cagcggcttgatgggagtacaaaggccgatttacgccaccaagcaatggaacattttaat
gcgcctggtagtgaagatttttgcttcctcctttcaactcgagctggtggccttggtatc
aaccttgccacagcggatacagtgataatattcgactcagattggaatccccaaaatgac
cttcaggcaatgagcagagcgcacagaatagggcaacaagaagttgttaacatctataga
tttgtcacaagcaaaagtgtcgaggaagatattctggagagagctaagaaaaagatggtg
cttgaccatttggtgattcaaaaattaaatgcagagggtaggttggagaagaaagaatct
aagaaagggactttatttgacaaaaatgagctgtctgctattctacgatttggggctgag
gaacttttcaaggaagacaaaaatgatgaagagagcaagaaaggactcttgagtatggat
attgatgagattcttgaaagagcagaaaaggttgaagagaaggaaactgcagaggaaggg
aatgaattgttgagtgcttttaaggttgcaaattttggtactggtgaagatgatggtagt
ttttggagtcgttggataaagccagaagcagtatcccaagctgaagaagcgcttgctcct
cgtgctacaaggaatactaagagctatgcagaagccgatcagcctgatagaagtaataaa
agaaaaaagaaagaatctgagcctcaggaaagagtccagaaaaggcggaaatcagattat
acagttacctctgctccaatgattggcggagcatctgctcaagttaggagatggtcttct
gggaacttatctaaaagagacgcattgcgagtttctcgtgctgttatgaaatttgggaat
gagagccaaattgcctcgatagttggggaggttggtggtgccgttgcagcagcttcaact
gaagcacaggttgagctttttaatgcattgattgatggctgcacagaagcagtggaagtg
gggagtctggactcgaaggggcccatgctggatttttttggtgtccctgtcaaagctggt
gatctgctcaatcgtgttcgtgaacttcagcacctggcaaaacgcattagtcgatatgac
gatcctattgctcagtttcgtgtcttgatgtacctcaaaccttcaaattggtcgaaaggt
tgtggttggaatcaaattgatgacgcaagattgcttattggaatatactaccatggcttt
ggaaattgggaaaagatacgtttagatgaaaggcttggccttacaaagaaaattgctcca
gtggaacttcaacaccatgaaacatttttaccccgtgctccaaatttaagagatcgtgct
aacgctcttttggaaatggaaattgcagcccttggtggaaagaatgcaaatgctaaagtg
ggtcgtaagtcttcaaaggatagggaaactactgtcaatgtttctttagctcgcagtggg
ctaaagaaaggaaaaactggttcttctagagttaatgttcaaatgaacaaggatagacca
ctgaaaccccagaaagttgaagctttagtgaaagaggagggtgaaatgtcggatgatgat
gaagtgtatgagaagttcaaggaggagaaatggatggaatggtgtgaagagatgatgaag
gatgaaactaaaaccttgaaacgtcttgaacggttgcagacgactagtgccaatcttcca
aaggaaaaggtgctttccaagattcgaagttatttacaacttcttggacgaacgatagat
caaattgttttagaaaatgaggaggaaccgtatggacaagataggatgaccatgcgcttg
tggaaatatgtttctaccttttcaaatctgtccggggagagacttcatcaaatatattca
aaacttaaacagcaccaggatgtggaggctggcccttcccacatgaacgactccgcttct
ggtccattcggcagagacagcgacccttctcccttctccttcccttcggacaggcaaaga
ggtcatgatacagccaagtttgaagcatggaaacggaggaggagaggggaagctgatagt
aatttccaagttcaggccccatctcaaagaaatatgaataatggtaccaggttaactgat
ccaagctcattagggattcttggtgcaagaccatcggaaaataaacgcactgtgaatgaa
aggccttacaggacgcgacaggcaggtttaccaacaaaacaaggttttacatcacgtatt
aagtag
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integrated database retrieval system
