Malus sylvestris (European crab apple): 126590885
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Entry
126590885 CDS
T09027
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00240
Pyrimidine metabolism
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
126590885
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
126590885
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Uma2
Motif
Other DBs
NCBI-GeneID:
126590885
NCBI-ProteinID:
XP_050112361
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Position
11:24854613..24874395
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AA seq
347 aa
AA seq
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MASSSSSSSAAISRLSNLRKHLHPSHLDKGGIGSIKISPEVSDALSNGRAVVALESTIIS
HGMPYPKNLETAKEVEAVVRENGAVPATVAILDGIPCIGLSMEELEKLANLGHKAQKTAR
RDIAHVVATRGTGATTVSATMFFASMVGIPLFVTGGIGGVHRHGEHTMDISSDLTELGRT
PVAVISAGVKSILDIPRTLEYLETQGVCVAAYRTNEFPAFFTETSGCKVPCRLDTPEDCA
QLIDANLKLELGGGILIAVPIPKEHSASGSLIESAIQRALDEARDKNIIGNDATPFLLKR
VNELTGGASLASNIALVKNNALVGAKVAVALAKTRERKNKGGAESAL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcctcttcttcttcatcagctgctatctcaagactctctaatctccgcaaa
cacctccatccctcgcatttggacaagggtggcatcggatcaatcaagatttctccagag
gtttctgacgctttgtccaatggccgtgctgttgtcgctctcgaatccaccattatttcc
catgggatgccgtatcctaagaacttggaaacagcaaaggaggttgaggcagttgtgagg
gaaaatggagctgttcctgccactgttgctattttggatggcataccttgcataggtctg
agtatggaagaattggagaagcttgccaatctgggtcataaagctcagaagacagctcga
agggatattgcacatgttgtggcaaccagagggactggagcaactactgtttctgcaacc
atgttttttgcttccatggttggcatcccattgtttgttactggaggaattggaggagta
catagacatggcgagcatacaatggacatatcttctgatcttactgagcttggaaggaca
ccagtagctgtcatctctgctggtgtaaaatcgatattggatatcccaaggacccttgaa
tatttggagactcagggagtttgcgttgctgcttataggaccaacgaatttccagcattt
tttacagaaacgagtggttgtaaggtgccttgccgtttagataccccagaagactgtgct
cagcttatagatgcaaatctgaaacttgagcttggaggtgggattttgattgctgttcca
attcctaaagagcactcagcttctggaagtttaattgagtctgcaatacagagagccctt
gacgaagctagggataagaacataataggaaatgatgcaactccattcttgctcaagaga
gtgaatgagctaacgggaggagcttcattggcttcaaacattgcactggtgaagaacaat
gcacttgttggagctaaagttgctgtagcacttgcgaagactagagaacgcaaaaataaa
ggtggtgcagagtcggcgttatag
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