Malus sylvestris (European crab apple): 126590959 Help Entry 126590959         CDS       T09027                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism msyl  Malus sylvestris (European crab apple) Pathway msyl04142   Lysosome biogenesis msyl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:msyl00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     126590959    04148 Efferocytosis     126590959  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msyl04131]     126590959 Membrane trafficking [BR:msyl04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     126590959 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 TPR_19 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  126590959 NCBI-ProteinID:  XP_050112440 LinkDB All DBs Position 2:complement(11149428..11155929) Genome browser AA seq 1004 aa AA seqDB search MVHSAYDSFELISDCPTKIEAIESYGPKILIGCSDGSLKIYAPDSSGTDRSLPSDYHGHR LQKEPYALERNVAGFSKKPLVSMEVLESRELLLSLSESIAFHGLPNLGTIAVITKAKGAN VYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGDNICIGIRREY MILNSTNGALSEVFPSGRIAPPLVVSLPSGELLLGKHNIGVFVDQNGKLCQEGRVCWSDS PNVVVVQKPYAIALLPRYVEVRSLRDPYPLIQTVVLRNARRILQSNDAVTVALENAVYGL FPVPLGAQIVQLTASGDFDEALALCKMLPPEEASLRAAKEGSIHMRYAHHLFDNGAYEDA MEHFLASQVDITYVLSLYPSIILPKTTMVAEPEKLMDISGDSSYLSRGSSGISDDMEHSL PSLLESEESAALESKKMSHNTLMALIKFLQKKRYGIIEKATAEGTEEVVLDAVGDNFVSY ESRFKKSNKGRGSIPVTSGAREMAAILDTALLQALLLTGQASVALELLKGLNYCDVKICE EILQKNNHYAALLELYRCNSMHHEALKLLHQLVEDSKSNQVQTELIQKLKPESIVEYLKP LCGTDPMLVLEYSMLVLESCPTQTIELFLNGNIPADLVNSYLKQHAPNMQATYLELMLAM DENGISGNLQNEMVHIYLSEVLDWYADLSAQQKWDEHTYSLTRKKLLSALESISGYNPEA LLKRLPTDALYEERAILLGKMNQHELALSLYVHKLHVPELALSHCDRVYESLVHLPSSRS SGNIYLTLLQIYLNPRKTTKNFEKRITNLVSPQNINTPKVGSANTVKSKGGRGAKKIAAI EVAPDIRVSQSSTDSSKSDGDAEESSEEGGSKIMLDEVLDLLSRRWDRINGAQALKLLPR ETKLQHLLPFMGPLLRKSSEAYRNLSVIKSLRQSENLQVKDELYEQRKGVVKVTSDSMCS LCRKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKTVGRGSPLWKT NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgcctatgattccttcgagctcatcagcgactgcccgacgaagatcgaa gccatcgaatcgtacggaccgaagatcctcatcggctgctccgatggatctctcaaaatc tacgctccggactcctccggcaccgaccgctctctgccgtccgattaccacggtcacagg ctccagaaggaaccgtacgcgctggagaggaacgtcgccggtttctcaaagaagcccttg gtttcaatggaggtcctggaatcgcgagagctcctcctttccctctcggagtcgattgcg tttcacggcctcccgaacttgggcaccatcgccgtgatcacgaaggcgaagggcgccaat gtctactcgtgggacgaccgcagagggttcctctgtttcgccaggcagaagcgggtctgt attttccggcacgacgggggacgagggtttgtggaagtgaaggaatttggggttccggat gtggtgaagtcgatgtcatggtgtggagataatatatgtatagggattagaagagagtat atgatactgaattctacaaatggtgcactgtcagaggtgtttccttcggggaggatagcg cctccattggtggtctctcttccttcgggagagcttcttcttggaaagcataatattggg gtttttgtggaccaaaacgggaagctttgtcaagaaggcagggtttgttggtcagattcc ccgaatgttgttgttgttcagaagccatatgcaattgctctgttaccaagatatgtcgag gtacggtccctccgagatccctatccattgatacagacggtagttcttagaaatgctcgt cgtattctacagagcaatgacgctgtaactgttgcattagagaatgctgtttatggtctg ttccctgttcctcttggtgctcagattgtacaattaacagcatctggcgattttgacgaa gctttggcattgtgtaagatgcttcctccagaagaagcaagtcttagagctgcaaaggag gggtcaattcatatgagatatgctcatcatctttttgataatggggcctatgaggacgcc atggagcactttttggcatctcaagtggatataacctatgttctttctttgtatccatct attattcttcctaagacaactatggttgctgagccagagaagctaatggatatttctggg gattcatcgtatctctcaagaggttcgtctggtatatcagatgatatggaacactctctg ccatcactactggaatctgaggagagtgcagcactcgagtccaagaaaatgagccataac actcttatggctctcataaagttcttacagaaaaaaagatatggcataattgaaaaggcc actgctgaggggacagaagaggttgttttagatgctgttggagacaattttgtgtcctat gaatctaggtttaagaaatcaaacaaggggcgtggcagcattccagttacctctggtgct agggagatggcagcgatcctggatacagcactactccaagctctacttcttactggacag gcttcggtggctttggaattactgaagggtcttaactactgcgatgtaaaaatatgcgag gagattctccagaaaaataatcactacgctgctttgttagaactttacaggtgcaattca atgcaccatgaagctctaaaactcttgcatcaattagtagaggattctaaatctaaccaa gtgcaaactgaacttatccaaaagttaaagcctgagtcaattgttgaatatctcaagcct ctttgtgggactgatcccatgctggtcctggagtattcaatgcttgttcttgaaagttgt ccaacgcagacaattgagctctttttgaatgggaatattccagcagacctggtcaactct tacttgaagcaacatgctccaaacatgcaggccacatacttagagcttatgcttgcaatg gatgaaaacggaatctctggaaatctgcaaaatgaaatggtacatatctatctatcagaa gtacttgattggtatgcagatttaagtgctcagcagaaatgggatgagcatacttactcc ttaacaagaaagaaattattgtctgctttagagagtatctcagggtataatccggaggct ttgttgaaacgtcttccaacggatgctttatatgaagagcgtgcaattttgttgggaaaa atgaaccaacatgagcttgccttatctctctatgttcataagcttcatgttcctgagctg gcactgtcccattgtgatcgcgtgtatgaatccttagttcatctaccatcttcaagatct tctggaaatatatacctaactctattacaaatttatcttaatccgaggaaaacaaccaag aactttgagaagcgaattacaaatttagtatcacctcagaatatcaatacaccaaaggtt ggttctgcaaatacggttaaaagtaaaggagggcgtggtgctaaaaaaattgctgcaata gaggtggcacctgacataagagtcagtcaaagtagcactgacagtagcaagagtgatgga gatgcagaggaatctagtgaggaaggagggtcaaaaatcatgcttgatgaggtccttgat ttgttgagccgaaggtgggacagaataaatggagctcaggcactcaaacttttgccaagg gaaactaagctacagcacttgcttccatttatgggacccctgttgaggaaatccagtgaa gcgtacaggaacctttcagttatcaagagtttgagacaaagcgagaacctgcaggttaaa gatgaactctacgaacaaaggaagggtgtggtgaaggtcaccagtgacagcatgtgctcc ctttgcaggaagaaaataggaaccagtgtctttgccgtatatccaaacgggaaaacatta gtgcactttgtgtgctttagagactcgcaaagtatgaaaaccgtgggcagaggatcgccg ctatggaagacatga

DBGET integrated database retrieval system