Malus sylvestris (European crab apple): 126590989
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Entry
126590989 CDS
T09027
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126590989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126590989
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
126590989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
Motif
Other DBs
NCBI-GeneID:
126590989
NCBI-ProteinID:
XP_050112476
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All DBs
Position
11:38714176..38717394
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AA seq
541 aa
AA seq
DB search
MDSATQTFHQRTVSIKLWPPSQSTRILLVDRMTKNLITPSIFSRKYGLLSKEEAEEDAKQ
IEDIAFAAGDQHFEKEPYGDGSSAVQIYAKESSRLMLEVLKRGPKVKEDGEVMQYEKATA
SHESVFDISGGRRSFIDSEEALELLKPLKEHEKSYTKICFSNRSFGMDAARVAEPILLSI
KDQLKEVDLSDFIAGRSEEEALKVMNIFSSALEGCVLRYLNLSDNAMGEKGVNAFGSLLR
SQNNLEELYLMNDGISEEAARAVSKFIPSTEKLRVLQFHNNMTGDEGAIAISEMVRRSPL
LEDFRCSSTRVGSEGGIALAEALGTCTHLKKLDLRDNMFGVESGIALSKSLSAFGDLTEI
YLSYLNLEDEGTEALASSLKETAPSLEVLEMAGNDITAGSAAALATCIAAKQFLTKLNLA
ENDLKDEGTILISQAISEGHGQLTEVDLSTNSIRRVGARVLAQAIVNKPGFKLLNINSNF
ISDEGIDEVKEIFKNSPDVLGPLDENDPEGEDLDEEADDEGADDKDDLESKLKGLDIKQG
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctacacaaactttccaccaacgcacggtgtctatcaaattatggcccccg
agtcagagcaccaggatactgcttgttgatcgaatgaccaagaatctcataactccgtcc
attttctctagaaagtatggcctgcttagtaaagaagaagctgaggaggatgccaagcaa
atagaagatatagcctttgcagctggagaccaacattttgagaaggaaccatatggtgat
ggaagttcggcagttcaaatttacgccaaagaatcaagtaggcttatgctggaagtccta
aaaagggggcccaaagtaaaggaagatggagaggtgatgcagtatgagaaagctactgct
agccatgaaagtgtctttgatatttctggtggtcgccggtcctttattgattctgaggag
gctttggaactgttaaaaccattgaaggaacatgaaaaatcttacaccaagatatgtttt
agcaatagaagctttggtatggatgcagcccgtgttgctgagccaatcttactgtctatc
aaagatcaactgaaagaagtagacctgtcagattttattgcaggaaggtcagaagaagaa
gctcttaaagtcatgaacatattctcttcagccctggaaggatgtgttttgaggtatctt
aacctttcagacaatgccatgggcgaaaagggtgtcaatgcatttgggtcacttctgaga
tcacaaaacaatttggaggagctttatctgatgaatgacggcatatcagaagaagctgca
agagctgtttctaagtttatcccatccactgagaagcttagggtccttcaatttcacaac
aacatgacaggagatgagggggcaattgccatctctgaaatggtgaggcgttcacctctc
ttggaggatttccgttgttcttccacaagggtgggttctgaagggggcatagctttagct
gaagcacttgggacttgtacccatttgaagaagcttgatttgcgtgacaacatgtttgga
gtagaatccgggattgctctgagtaaatccctatctgcttttggagatcttactgaaatc
tacctgagttatctgaacttagaagatgaaggaacagaagcacttgccagttctctcaaa
gagactgcaccttcgcttgaagttctggaaatggctggaaatgacattacagctggatcg
gctgctgctctagcaacctgtatagcggcaaaacaattcctaaccaagttaaacttagct
gagaacgacctgaaagatgaaggtacaattttgattagccaagcaatttcagagggtcat
ggtcagttaactgaggttgatttgagcacaaattcgattagaagggttggagcaagggtt
ttggcgcaggctattgtgaacaaacccgggttcaagttgctgaacattaatagcaatttc
atatccgacgaggggattgatgaggtaaaggaaattttcaagaattcaccagatgtgctg
ggacccttggatgagaatgatcctgaaggcgaagaccttgacgaggaggctgatgatgaa
ggggctgatgacaaggatgatttggaatcaaagcttaagggccttgatattaagcaaggg
gagtaa
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