Malus sylvestris (European crab apple): 126591039
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Entry
126591039 CDS
T09027
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl03015
mRNA surveillance pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126591039
09122 Translation
03013 Nucleocytoplasmic transport
126591039
03015 mRNA surveillance pathway
126591039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126591039
03041 Spliceosome [BR:
msyl03041
]
126591039
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126591039
Spliceosome [BR:
msyl03041
]
Complex C
Other components
EJC/TREX
126591039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
126591039
NCBI-ProteinID:
XP_050112530
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All DBs
Position
11:complement(25374631..25379666)
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AA seq
202 aa
AA seq
DB search
MASGDVETVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGVGAASAVPKKTKGR
GFREDLNADRNSHLAASDFDSVNSSDGLEPQRSVEGWIILVTGVHEEAQEDHLQDAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFKEAKTAIDKMNGEALLTQVLTVDWAFSNGSFL
DGSRKNSRPLRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagacgtagaaacggtggacttcgagcccgaagatgacgacctcatggac
gaggacggagccgtcgacgccgagccctccgcctcccccagggccccactccccaagctc
aagtccgctatcaccggcgtcggagcggcgtccgccgtccctaagaagaccaaaggtcgc
ggattccgtgaagatcttaatgccgaccgtaacagccacctcgctgcctccgacttcgac
tctgtcaactcttctgacggcctcgaaccccaacgatccgttgagggatggattattctg
gtcactggggtacatgaggaggcccaagaggaccacctacaggatgcatttggtgaattt
ggggagataaaaaatttgcatttaaatcttgatcgccgcactgggtttgtgaagggatat
gcactgattgaatatgaaagttttaaagaggcaaaaactgcgatagacaaaatgaacgga
gaggcattgcttacacaagttttaactgttgattgggccttcagcaatggatccttcctt
gatggatccaggaagaactcaagaccactaagagaacgtcgctcaaggagtcctaggagg
agatactaa
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