Malus sylvestris (European crab apple): 126591121
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Entry
126591121 CDS
T09027
Name
(RefSeq) LEC14B protein-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126591121
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126591121
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GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR54
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
126591121
NCBI-ProteinID:
XP_050112646
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Position
11:complement(39537509..39541619)
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AA seq
479 aa
AA seq
DB search
MDEFDEMGYSLSRLIPESDHFDHGNAALHPNKPLHNIEHEVAQLTKLRSNPNERLTRIGP
RRQDLPVSTIRMLAGREGNYSGRGGRFSSADRCHVLSRYLPVNGPWLVDKMSSRAYVSQF
SADGSLFIAGFQDSHIRIYNVDRGWKVQKNIHAKSMQWSVTDTSLSPDQRHLVYASMSPI
VHMVDVGSSETESPANITEIHEGLDFSSGDDDGGYSFGIFSIKFSTDGHELVAGSSDDSI
YVYDLEANKLSLRIPAHSSDVNTVCFADESDHLIYSGSDDTLCKVWDRRCLKTTGKPAGV
LTGHLEGIAFIDSKGDGRYFISNGKDQTIKLWDIRKISSSPTRTPGIRISDWDYGWMDYP
SQAKDMKHPSDQSVATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSHNSYVYIYDLVTGA
QVAALKHHKEPVRDCSWHPYYPMLISSSWDGGVVRWEFPGSGEAPAPYPRKRLWRRQFY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttgatgagatgggatattcactcagtagattgataccagaatccgaccat
tttgatcatggaaatgctgccctccatcccaacaaaccattgcataatatagagcatgaa
gtagcccagctcacaaagttgagatcaaatcccaatgagcggcttacccgaattggacct
agaaggcaggacttacctgtttccacgatcaggatgcttgctggtcgagagggtaattat
tcgggaagagggggaaggttctcatccgcagatcgttgccatgttctaagtagatatttg
ccggtcaatggtccttggcttgtcgacaaaatgtctagccgagcttatgtatctcagttt
tcggcagatggatctcttttcattgctgggtttcaggatagccatattagaatatacaat
gtggatagagggtggaaagtccagaagaacatccatgccaaaagtatgcaatggtctgtc
actgatacgtctctttccccggatcaacgccatcttgtttatgcgagtatgtcccctatt
gttcatatggtagatgtgggatcttctgaaacggagtctcctgcaaatataacggaaatc
catgagggtttggatttttcctctggtgatgatgatggagggtactcatttggtattttc
tccataaaattctcaacagatgggcatgaacttgttgctggaagtagtgatgattccata
tatgtttatgatcttgaagccaataagctctcccttcggattccggcacactcttctgat
gtgaacactgtatgctttgccgatgaaagtgaccatcttatttattctgggagtgacgat
actctctgtaaggtgtgggacagacgttgccttaaaaccacagggaagccagcaggagtc
ttgacaggacacctagaaggtattgcattcattgacagcaagggagatggtcgttatttc
atttcgaatggtaaagatcagaccattaaactttgggatatcaggaaaatttcttctagt
cccactcgcactccagggattaggatttctgattgggattacggatggatggactaccca
tctcaggcaaaagatatgaaacatccctctgatcaatcagtagccacgtatagaggacat
tcagtcttgcgcacgcttattcgctgctacttttctccggcatatagcaccggtcagaag
tacatctacacggggtctcataactcttacgtttatatatatgatttggtgactggagcc
caagttgcagcgctcaagcatcataaagaacctgtaagagactgtagctggcacccctat
tacccgatgctcataagctcttcttgggacgggggagttgttagatgggaattccccggg
agtggagaagcgccggcgccttacccccgaaagagactctggaggagacagttttattga
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