Malus sylvestris (European crab apple): 126591298
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Entry
126591298 CDS
T09027
Name
(RefSeq) probable galacturan 1,4-alpha-galacturonidase SALK6 isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126591298
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
126591298
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
126591298
NCBI-ProteinID:
XP_050112906
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Position
11:complement(40353386..40355598)
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AA seq
546 aa
AA seq
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MSMGLRLPNMRGIARRASAKAVFLLGFALLSCVAQSTSRGHLYRAGARRSVLDATNRKVF
DVTAFGAKTEDQMKGGGNKANVVGKLSVQELPGGGIPGLPGGSAEESFADEKIDESGPDE
TGAGESPEEENGSAFIRTWVAACRGNYSGPTKVVIPKGTFLIGPVVFQGPCNSSTEPIVV
EVQGYVKASTDLSQYSSPEWFTFELVDGLIITGDGTFDGQGQNVWKTRDNKESSSASNAP
SSLKFNKVNNTLIEGITSLNSKFFHTHMFGCKNVTMSNVHLIAPGDSPNTDGLHISTSSQ
IKVLNSVMATGDDCVSIGQGSHDITVKNVTCGPGHGISIGSLGKYADELSVSQIYVSNCT
FRNTTNGARIKTWAGESAGEATGIIYEDIIMDQVQNPIIIDQNYGAKKKVKKNIFGNKKM
VVSGNKKRVRAGLGKKVGAGLKKKVGAGKKKALQGGKKKSEAAGPPSGPASKWKISDVHF
RNIRGTSARNVAVSLACSSAKPCEGVELTDINFSYQGTSTKSTALTSECFNAKITSKGVQ
NPPLCR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgggattgaggttgccaaatatgcggggcattgcaaggagagcatcagccaag
gctgtgtttcttctcggcttcgctttgctttcttgcgtggcccaatctacatcccgtgga
catctttatagggctggtgcccgcaggagcgttctcgacgccaccaataggaaagtgttt
gatgtcacggccttcggtgctaagaccgaagaccagatgaaaggaggaggtaacaaggct
aatgttgttggcaagttgagtgtacaggaactgcccggtggaggtataccaggcctcccc
ggtggttctgcggaggagagttttgctgatgagaagattgatgaatctggaccggatgaa
accggagcgggtgaaagccctgaagaggaaaatggatcggcattcatccggacgtgggta
gccgcatgcagaggaaactacagtggtccaactaaggttgtgatccccaaaggaacattc
ttgataggacctgtggtgttccaagggccatgcaacagctcaactgagcccatcgtcgtt
gaagttcaaggatatgtcaaagccagcactgatctcagtcaatactcctctcccgagtgg
tttacatttgagttggttgacggcttgatcatcaccggtgacggaacttttgacgggcaa
ggccagaacgtatggaaaaccagagataacaaggaatccagcagcgcttctaatgcccca
tcgtcacttaaattcaacaaagtaaacaacaccctgatcgaagggatcacatccttaaac
agcaaattcttccacacacacatgttcggctgcaaaaatgtgacaatgagcaatgtccac
ctcattgctcctggagatagccctaacacagatggcctgcatatcagcacttcgagccag
atcaaagtgcttaacagcgttatggcaactggcgatgactgcgtttccatcggccaaggc
tctcatgatatcaccgttaagaacgtcacctgtggtccaggacatggcatcagcatcggg
agcctcggaaagtacgcggacgaactgagcgtcagtcagatttacgtgagcaactgcaca
ttcagaaacaccaccaacggtgccagaatcaagacttgggctggcgaaagtgcaggagaa
gcgaccggaatcatctacgaagacattatcatggaccaagttcaaaaccctattatcatt
gatcagaactatggtgccaagaagaaggtaaagaaaaacatctttggaaataaaaagatg
gtagtgtcaggaaataaaaagagggtaagggcaggattaggaaagaaggtaggagcagga
ttaaaaaagaaggtaggagcaggaaaaaagaaggcactgcaaggtgggaagaaaaagagc
gaagcagctggaccaccttctggaccagcatcaaagtggaagatcagtgacgttcacttc
agaaacattaggggcacctcagccagaaacgttgccgtttcgttagcttgcagctctgca
aaaccatgcgagggcgttgagttgaccgatattaacttttcctaccagggcaccagtacg
aaaagcacggcgcttacatctgagtgtttcaacgccaagattacatcaaagggcgtacag
aacccaccactctgccgttaa
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