Malus sylvestris (European crab apple): 126591807
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Entry
126591807 CDS
T09027
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126591807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126591807
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126591807
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_29
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
126591807
NCBI-ProteinID:
XP_050113462
LinkDB
All DBs
Position
12:complement(8926395..8947673)
Genome browser
AA seq
1889 aa
AA seq
DB search
MGTGRRQLKIMLWKNWLLKVRHPFVTCAEILLPTVVMLLLIAVRMHVDTQIHPAQPYIRN
GMFVEVGKGVSPNFEQVLELLLNKEEFLAFAPDTEETRSMINIMSVKFPLLKRVSRVYKD
EQELETYIRSDLYGTCNQILNCLNPKIKGAVVFHDQGPQSFDYSIRLNHTWAFSGFPDVK
SIMDTNGPYLNDLELGVNAVPTMQYSASGFLTLQQVLDSFIIFAAQQSDTKDIELPSSLS
FGEPSFLNVPWMHYSPSNIRIVPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISRLISY
SVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSAIITVSTMGNLFKYSDKSVVF
IYFFFFGLSAIMLSFLISTCFTRAKTAVAVGTLAFLGAFFPYYSVNDEAVPMILKVVASL
LSPTAFALGSINFADYERAHVGLRWSNIWRASSGVNFLVCLLMMLLDALLYCLIGLYLDK
VLPRENGIRYPWNFIFQKCFWKNPSIKELNNHNSSLEVNSHDKDCKKASFSGKDNARASV
EAITFDMKQQELDHRCIQIRNLHKVYASKKGKCCAVNSLELTMYENQILALLGHNGAGKS
TTISMLVGLLRPTSGDALVFGKNIVTDMDEIRKELGVCPQSDILFPELTVREHLEIFAIL
KGVQEDLLNGAVVDMVDQVGLADKMNTAVRALSGGMKRKLSLGIALIGNSKVIILDEPTS
GMDPYSMRLTWQLIKKIRKGRIVLLTTHSMDEAEVLGDRIAIMANGSLKCCGSSLFLKRQ
YGVGYTLTLVKSTPTACVASDIVYRHIPSATCVSEVGTEISFKLPLASASSFECMFREIE
NCMKRSTSNSETSSGEEKDYLGIESYGISVTTLEEVFLRVAGCDYAEAASFEQKTGQQCL
DSLISQSSHDSSPKKISESKKSFGYYKEILGFLFRIVGRACGLVVATVLSFLNFVGGHCC
SCCFISRSTFWRHSKALLTKRAISARRDRKTIVFQLVIPAVFLFFGLLFLKLKPHPDQQS
VTFTTSHFNPLLRGGGGGGPIPFNLSLPIAKEVAQYVKGGWIQEFRPSAYRFPNSDKILD
DAVEAAGPTMGPVLLSISEFLMSSFNESYQSRYGAILMDDQNDDGSLGYTVLHNSSCQHA
APTFINLMNAAILRLAARNKNMTIQTRNHPLPMTNSQHLQRHDLDAFSAAVIVSIAFSFI
PASFAVPIVKEREVKAKHQQLISGVSILSYWASTFIWDFISFLFPSLFAIILFYIFGLEQ
FIGSGYLLSTVVMFLAYGLAIASSTYCLTFFFSDHSMAQNVVLLVHFFTGLILMVISFIM
GLIKTTASANSFLKNFFRLSPGFCFADGLASLALLRQDMKDKSSNQALDWNVTGGSICYL
GIESICYFLLTLGLELLLSNKWTLATLKECWNNIRSIEHGTPSYLEPLLKSSSDVTLDLD
EDIDVKTERTRVLSGSIDNAIIYLRNLWKVFPGGKHHSAKIAVHSLTFSVQEGECFGFLG
TNGAGKTTTLSMLTGEESPTDGTAYIFGRDICSNPKAARRHIGFCPQFDALLEFLTVKEH
LELYATIKGVPDHRLDDVVMEKLMEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIV
ILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRC
IGSPQHLKTRFGNHLELEVKPFEVSSVDLQNLCRVIQEWLSSVPSHPRSLLDGLEICIGA
DSILAENATVAEISLSREMIIMIGRWLGNEERIKTLISPLPISDGVIGEQLIEQLVRDGG
IPLPIFSEWWLSNEKFSAIDSFVLTSFPGAIFQGFNGLSAKYQLPYGQGLSLADVFGHLE
RSRHQLGIAEYSISQSTLETIFNHFAANS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggacggaggcagttgaagattatgctatggaagaattggcttctcaaagtt
cgtcaccctttcgtcacctgcgctgagatattacttcctacagtggtgatgttgttgtta
atagctgtgaggatgcatgttgatacacagattcatccagcgcagccgtatatccggaat
gggatgtttgtggaagtgggcaaaggagtgtcacctaattttgaacaagtattggaatta
ctgttgaataaggaagagtttctggcttttgcaccagatacagaagaaacaaggtcaatg
attaacataatgtcggttaaatttcccctcttgaagcgtgtttctagagtttacaaagat
gaacaggagctggaaacctacatacgctcagatctctatggtacctgcaatcaaatcttg
aattgcttgaatccaaaaatcaaaggagcagttgtatttcatgatcaaggtcctcaatca
tttgattatagcatacgtcttaatcacacatgggctttctcgggatttcctgatgtcaaa
tccatcatggacacgaatggcccctacctcaatgacttggaacttggcgtaaatgctgtt
ccgaccatgcaatacagcgctagtggatttttaactctccagcaagtactggattcattt
attatttttgcggcccaacaatctgacaccaaggatatagaacttccttcatcgctgtcc
tttggtgaaccttcctttctaaacgttccatggatgcattacagcccatcaaacattcga
atagtcccgtttccaactcgtgaatacactgatgatgagttccagtccatcataaaaagt
gtgatgggtgtattgtatcttctgggattcctctacccaatttctcggttgatcagctat
tcggtgtttgagaaggaacagaagataaaagaaggtctttatatgatgggtctaaaagac
gggatattccatctctcatggttcattacatatgctttgcagttcgctatttcttctgca
atcattacagtttccactatgggtaaccttttcaaatatagtgataagtcagttgtgttc
atttacttcttcttcttcggactgagcgcgattatgctgtcatttttaatctcgacatgc
ttcacacgggcaaagacagctgttgctgttgggacccttgcttttctgggtgcttttttc
ccttactactctgtcaatgatgaggctgtccctatgatattaaaggttgttgcttctctg
ctttcgcccacggcatttgctctagggtcaattaactttgctgattatgagcgtgctcat
gttggccttcgttggagcaacatatggcgggcatcatctggagtgaattttctggtctgt
ctactgatgatgttgctcgatgcattgctctactgtttaattggtctttatctggacaag
gtccttccgagggagaatggaattagatatccatggaacttcatttttcagaagtgcttc
tggaaaaatccaagcattaaggaacttaataatcacaattccagtctagaagttaatagc
catgacaaggactgcaagaaggcaagtttttctgggaaagataatgccagagcatctgtg
gaagcgataacctttgacatgaaacaacaagagcttgaccatagatgcatccaaataagg
aatctgcataaggtttatgccagtaaaaaggggaaatgctgtgctgttaactcattagag
ctcaccatgtatgaaaatcagattcttgctcttctaggacacaacggggctggtaaaagc
acaacgatatcaatgcttgttggccttcttcgccctacttcaggggatgctttggttttc
gggaagaatattgttacagacatggatgagatacgaaaggaattgggggtgtgtcctcaa
agtgatatcctttttccagaattgacagtgagggaacatttggaaatatttgctatactg
aagggtgtgcaggaagatcttctgaacggcgctgttgttgatatggttgatcaagtaggt
ttggctgataaaatgaacactgctgtgagggctctatctggaggcatgaagaggaagttg
tctcttggaattgcactgataggaaacagtaaggttataattttggatgaacctactagt
ggaatggatccatactccatgcgcttgacatggcagctaataaaaaaaatcagaaaggga
aggatagtgttactgacaacgcactcaatggatgaagctgaagtacttggagatcgtata
gccatcatggctaatggttccttgaaatgttgcggaagttcccttttcttgaagcgtcag
tacggggttggttatactttaaccttggtgaaatcgacacctactgcctgtgtagcttct
gacattgtttaccgccatatcccatcagcaacatgtgtgagcgaggtaggaacggagatt
tcctttaagcttcctttggcatccgcatcatcctttgaatgtatgtttagggaaattgag
aattgcatgaaacgatctacatcaaactcagaaacaagttctggcgaggagaaggactat
ttgggcattgaaagttatggaatatctgtaacaactttggaggaggtattcttgagggtt
gcaggatgcgactatgctgaagctgctagttttgaacagaagactggtcaacagtgtctt
gattctttgatttctcagtcttctcatgattcttctcccaaaaagatctctgagtcaaaa
aaatcctttggatattataaagagattcttgggttcttatttagaatagtgggaagagcc
tgtggtttggttgtcgctacagttttaagttttttaaactttgttggtggtcattgctgt
agctgttgtttcatttcaaggtcaactttttggcgacattctaaagcattgctcacaaag
agggcaatatctgctcgtagagaccggaaaacaattgttttccagcttgttattcctgca
gttttcttatttttcggtcttctgtttctcaagctcaagccacatcctgatcagcagtct
gttacatttacaacttcacattttaatccactattacgaggtggtggtggtggtggccca
atcccttttaatctgtccttgcctattgcaaaggaggttgcacagtatgttaaagggggt
tggatacaagaattcagacctagtgcatatagattccctaattcagataagatattggat
gatgcagttgaggcagctgggccaaccatgggacctgttttactttcaattagcgaattt
ttaatgtctagctttaacgaatcttaccagtcaaggtatggggcaattttgatggatgat
cagaatgatgatggaagtttagggtacactgtgctacacaacagttcctgtcagcatgct
gcccctacctttatcaatttaatgaatgctgcaattcttaggcttgctgctcgtaataag
aatatgacaatccaaacgcgtaatcaccctctcccaatgacaaatagccaacatctgcaa
cgtcatgatttggatgcattctcagctgcagttattgttagtattgcattttcattcatc
cctgcatcatttgccgttcctattgtgaaggagcgtgaagtaaaagccaaacaccaacaa
ctgattagtggggtttctattctttcatattgggcttctactttcatatgggacttcatc
agcttcctttttccttcattgtttgcaataattcttttttacatctttggtctggagcag
ttcattggaagcggatatttattgtcaacagttgtcatgtttttagcgtatggattagca
atcgcatcatccacatattgccttacatttttcttctctgaccacagtatggctcagaat
gtggttctcttggtccacttctttacgggactcattcttatggttatctcattcatcatg
ggacttataaagacaacagcaagtgcaaattcttttcttaagaactttttcagattatct
ccagggttttgctttgctgatggacttgcatcactggctcttctccggcaagatatgaaa
gataaatccagcaatcaggcccttgattggaacgttactggtggctcaatttgttatctt
ggtattgagagcatttgttacttccttttgacacttgggcttgaactcttactttctaac
aagtggacactagccacactgaaggaatgttggaacaacattagaagtatcgaacatggc
accccaagttatctagaaccccttctgaagagttcctcagatgttactcttgaccttgat
gaagatatcgatgtaaagacagaaagaactagggtgctttcaggttccattgacaatgcc
ataatttatttgcggaatctttggaaggtgtttccaggaggaaagcatcatagtgcaaaa
attgcggtacattcattgactttctcagttcaggaaggggagtgttttggttttttagga
acaaatggagctggaaagaccacaactctgtcaatgctgactggagaggaatctccaact
gatgggactgcttatatatttggaagggatatatgctctaatccaaaggctgctcgtcga
catattggattttgcccacagtttgatgctttgttggaattcttaactgttaaagagcat
cttgagctttatgccacaataaaaggagtaccagatcaccggttggatgatgttgtaatg
gaaaagttaatggagtttgacttgttaaagcatgccaacaaaccatcattttctctcagt
gggggaaacaagcgtaaattatctgtcgcaattgcgatgattggagatcctcctatagtc
attcttgatgaaccgtcaacaggtatggatccaattgccaaaagattcatgtgggaagtg
atatctcgtctatcaaccagacgaggaaagacagcagtaatacttactacgcatagcatg
aatgaagctcaagcactttgcactcgtatggggatcatggtcggaggtcgattaagatgc
attggtagtccccagcatttgaaaactcgatttggaaatcatcttgagctagaggttaaa
ccttttgaagtcagctctgtggacttacaaaatctgtgccgagttattcaagaatggctg
tcatctgttccatcccatcccaggagcttacttgatggccttgaaatatgcattggggca
gactccattctggctgaaaatgccacagtggcagagattagtttgtcgcgagaaatgata
attatgattggacgatggcttggcaatgaagaaagaataaagacactaatatctccgctg
ccaatttctgatggggtgattggtgaacagttaattgagcagttggttcgagatgggggt
ataccattgccaatattttctgagtggtggttgtccaatgagaagttttcagcaattgat
tcatttgtcctcacatcattccctggtgcaatattccaggggtttaatggcttgagtgct
aaataccagttgccatatggacagggcctctcgcttgcagatgtctttgggcaccttgaa
cggagcagacatcaacttggcattgcggaatacagtattagccagtccactcttgaaact
attttcaaccattttgcggctaactcgtga
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integrated database retrieval system
