Malus sylvestris (European crab apple): 126591988
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Entry
126591988 CDS
T09027
Name
(RefSeq) WD repeat-containing protein LWD1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126591988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126591988
03036 Chromosome and associated proteins [BR:
msyl03036
]
126591988
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126591988
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
126591988
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_Vps41
MIOS_WD40
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR41
eIF2A
Beta-prop_DCAF12
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
126591988
NCBI-ProteinID:
XP_050113696
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All DBs
Position
12:complement(3231165..3235090)
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AA seq
335 aa
AA seq
DB search
MQRPAEKKAGVHTYISQWPIYSLAWSVRHDKPSRLAIGSFIEDYGNKVELVQFNQDTSDF
ATDNRLTFDHPYAPTNLMFFPSEDTTNPDLIATSGDYLRLWEIHDDRIELKSLLNSNRSS
EFNSAITSFDWVECDTRRVATSSVDTTCTIWDIEREAVDSQLVAHDKEVYDISWGGFNVF
ASASGDGTIRVFDLRNKERSTIVYENPTQDRSLLRVEWNKHDPRFIATVGMDSNKVVIVD
IRFPTSPLMELKKHGASVNAISWSPGKGHQICSVSDDSRAMIWDVVRPGFQSDSGGDIEP
EMWYGTTAQINQVRWSAVENGIGIGFLNKLQLLKV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaccagcagagaaaaaagcaggcgtccacacctacataagccaatggccaatc
tactccttagcatggtcagtccgccatgacaagccttcacgcctagccataggcagcttc
attgaggactacggcaacaaggttgaattagtccagttcaaccaagacacatccgatttc
gccaccgataaccgcctcactttcgaccacccttacgcaccaaccaacctcatgttcttc
ccatccgaggacaccacgaatcctgatctaatcgccacgtccggcgactacttaaggttg
tgggagatccatgatgataggattgagctcaagtctttgctgaatagcaacaggagtagt
gagtttaattcggctataacgtcttttgattgggtagagtgtgacactaggcgtgtggct
acgtctagtgtggacactacctgcacaatttgggacattgagagggaagctgtggatagt
caactggtggctcatgataaagaagtgtatgacatttcttggggtggcttcaatgtgttt
gcttcagcttctggtgatggcactatcagggtgtttgatttgagaaacaaagagaggtct
accatagtttatgaaaaccctactcaagacagatctttgttgagggtagaatggaacaag
catgacccaagattcattgccacagttggaatggacagcaacaaagtggtaatagtggac
atcagatttcccacatcacctctaatggagctcaaaaaacatggtgccagtgtgaatgca
atttcatggtctccagggaagggacaccagatttgttcagtaagtgatgattcaagggct
atgatttgggatgtggtgaggcctggatttcaatcggacagtggcggcgatatcgagccg
gagatgtggtatggaacgacggctcagattaatcaagtgcgttggtctgctgtagagaac
gggatcggtattggctttttgaacaagttgcagctcttgaaggtttaa
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