Malus sylvestris (European crab apple): 126592243
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Entry
126592243 CDS
T09027
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126592243
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
126592243
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
IMPa_helical
Motif
Other DBs
NCBI-GeneID:
126592243
NCBI-ProteinID:
XP_050113922
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Position
12:20940029..20941564
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AA seq
406 aa
AA seq
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MVGYWAFVFLFLASIANAKAEVFYVTNSTYGGNPSGDITLALADAWRDACSSPWPAKVVI
PEGEYYLRGAILHGPCKSPIEVQVQGYLRAPQESSQLLQQNTWVGFQYVDRLTLFGGGTF
DGQSNCHKYKSCQSNRVFNLRFDFVTNSVIEGITSLDSKNFHINVFACRNVTFQYVTITA
PEDSVNTDGIHIGRSFGVTIDHTIIGTGDDCISLGDGSQNIVVTDVTCGPGHGISIGSLG
KYPDEEPVVGVRVKNCTLTNTQNGVRIKTWPGSPTFTTASHIHFQEITMVNVSNPISIDQ
EYCPYTYCGKDDPSKVKISDISFTNIKGSSATPVAVKLMCSRKIPCDGVGLTDVDLTYIG
SKGPLTSQCAYVKPYISRVANALACATWSYSNSLRSGRNLTNLLTR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttggctattgggcttttgtgttcttattcttagcatctattgctaatgcgaaagcc
gaagtcttttatgtgacaaattcaacatatggaggaaaccctagcggcgatattacgctt
gctttggctgacgcttggagagatgcctgttcatcgccatggccagccaaagttgttatt
ccagaaggggaatactacttaagaggagcaattttacatggtccatgcaaatctcccatt
gaggttcaagttcaagggtatttgcgtgctccacaagaaagcagccaactccttcaacag
aatacttgggttggctttcaatacgttgacaggctcaccttatttggtggtggaactttt
gatggccaaagtaattgccacaaatataaaagttgccagtccaacagagtatttaatttg
aggtttgattttgtcacaaattcagtgatcgagggcataacttcactagacagcaaaaat
ttccacatcaatgtttttgcatgtcgcaatgttacattccaatatgttactatcaccgca
cctgaagacagcgtcaacacagatggaattcacatcgggagatcgtttggggtcaccatt
gatcacacaataattggaacaggtgacgactgcatttctcttggtgacggtagccagaac
attgtcgtgaccgacgttacttgtggaccagggcatggcataagcatcgggagcctagga
aagtatccagacgaagagcccgtggttggagtcagagtgaagaactgcacactcactaac
acacaaaatggtgtgagaatcaaaacatggccgggttctccaacatttacaactgcctcg
catattcactttcaagagattaccatggtaaatgttagtaaccctatttctatagaccaa
gagtactgcccttacacttattgtggaaaagatgatccatccaaagtcaagataagcgac
atcagtttcaccaacatcaagggctcatctgcaaccccagttgcagtcaagcttatgtgc
agtagaaaaataccgtgtgatggagtcgggttgactgacgtggacctcacgtacatcgga
agcaaaggccctctcacctctcaatgtgcttatgtcaagccctacattagtcgcgtggcg
aatgctcttgcttgtgctacctggtcatattctaatagtctaagaagtggaagaaatctc
actaatcttctcactagataa
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