Malus sylvestris (European crab apple): 126592666
Help
Entry
126592666 CDS
T09027
Name
(RefSeq) DNA polymerase delta small subunit-like isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
msyl03410
Base excision repair
msyl03420
Nucleotide excision repair
msyl03430
Mismatch repair
msyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126592666
03410 Base excision repair
126592666
03420 Nucleotide excision repair
126592666
03430 Mismatch repair
126592666
03440 Homologous recombination
126592666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126592666
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126592666
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
126592666
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
126592666
MMR (mismatch excision repair)
DNA polymerase delta complex
126592666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
126592666
NCBI-ProteinID:
XP_050114375
LinkDB
All DBs
Position
12:complement(6162010..6166987)
Genome browser
AA seq
442 aa
AA seq
DB search
MEAMEIDSEKNLHRKHSAYTLLDERFEIQKEMYRGQQYSQIYFVRLHMMRTLLYSLVPNW
KPHLPVRTVLGLERDKECIIVGTLYKHMKLKPCVLDEYSKTRSVTPLVKPHNFVHPDDHL
ILEDESGRVNLSGNVLSPTVYVTGTVVGLHGKETDAGDFLVLDVLEAGLPPQIELPLKSR
EGKYVVFVSGLRVGSSSLNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSIEVPR
GLLNGQNLALKDQSRLSEPIKELDILLTQIAAGLPLDIMPGLDDPANFALPQQPLNRCLF
PGSSAYNTFRSCTNPHCFDLDDVRFLGTSGQNIDDLDKYSEAKDKLDFIERTLRWRHLAP
TAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYDSRLVNGTEGQMVRLISIPKFCETGI
AVVLNLGNLECHTLSFGTQFSS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaaatcgattcggagaagaatctccacagaaagcattccgcctacacc
ttgctggacgagaggtttgagattcagaaggaaatgtacaggggtcaacagtacagccaa
atatacttcgtccgtctacatatgatgaggacgctcctctattcccttgtccctaactgg
aaaccccatttgccagttcgcacagttttgggattggaaagggacaaggaatgcatcatt
gttggaaccctctacaagcacatgaaactcaagccttgtgttcttgatgagtactctaag
acgagatctgtgacaccacttgtcaagcctcataattttgtgcacccggatgaccatctg
attttggaagatgaaagtggaagagttaatctttctgggaatgtgctttcacctactgtg
tatgtaacagggactgttgttggtttacatggaaaggagactgatgccggtgacttctta
gtcctagatgtccttgaagctggcttaccaccccagatagaattgccactgaaatcaaga
gaaggaaaatatgttgtttttgtatctggacttcgtgttggaagcagctctttaaaccct
ctgcagtttcagcttcttgttgatcatataacaggacatttaggagatgagaaggaacaa
ggtattgcagcacaaatagttcatgttgtaattgctggaaattctattgaggttcctcgt
ggacttcttaatggacagaatttagcattaaaggaccaatcaaggttgtctgagccaatt
aaggagttggatatcttgttgactcagattgctgcaggtttgcctttggatatcatgcct
ggtctcgatgaccctgctaattttgccttgccacagcagcctttgaacagatgccttttc
cctgggtcatcggcttataacacgtttagatcatgtaccaatcctcattgctttgatctt
gacgatgtcaggtttcttggaacatcggggcaaaatatagatgatcttgataagtattca
gaagcgaaggataaacttgattttatagaaaggacattgaggtggaggcatctggcacca
acagcacctaatacccttgggtgttatcctttcacggacagggatccattcctgatcgag
agttgtcctcacgtttactttgttggtaatcaggataaatatgatagtcgcttagtaaat
ggaactgaagggcagatggtgagactcattagcattcctaaattctgtgagacgggaatt
gctgttgtgttaaacttagggaatcttgaatgccatacactcagttttgggactcaattc
agctcataa
DBGET
integrated database retrieval system
