KEGG   Malus sylvestris (European crab apple): 126592716
Entry
126592716         CDS       T09027                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03020  RNA polymerase
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126592716
  09124 Replication and repair
   03420 Nucleotide excision repair
    126592716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126592716
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126592716
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     126592716
  RNA polymerase III system
   RNA polymerase III
     126592716
  RNA polymerase I system
   RNA polymerase I
     126592716
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126592716
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon zinc_ribbon_13 DUF5816 LysW-like_globular HypA DZR Fin C1_1 Zn-ribbon_8 DUF1451 SHLD2_C TF_Zn_Ribbon ZnF_RZ-type
Other DBs
NCBI-GeneID: 126592716
NCBI-ProteinID: XP_050114439
LinkDB
Position
12:8188022..8190177
AA seq 52 aa
MDPPPPEAVYYICGDCGMEVQLKSNDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatcctccgccgccagaggccgtctactacatctgtggagattgtgggatggaggtg
cagctgaaatccaacgacgtgattcagtgccgcgagtgcggttaccgtatcttatacaag
aagcgtactcgccgcattgttcagtacgaggcacgctga

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