Malus sylvestris (European crab apple): 126592780
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Entry
126592780 CDS
T09027
Name
(RefSeq) autophagy-related protein 18a-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126592780
Membrane trafficking [BR:
msyl04131
]
Autophagy
Other autophagy associated proteins
Others
126592780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
126592780
NCBI-ProteinID:
XP_050114518
LinkDB
All DBs
Position
12:complement(28686819..28696765)
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AA seq
425 aa
AA seq
DB search
MTAVSSPPFQFVLLDWTPDLLNTPNMAHPQPQSQQPPNSASDSEPGDSHSLSTQYPSPGP
NPNPNQIPKIHNLSFNQDHGCFSVATDSGFRVYNCDPIRELLRRDSGQQGVGMVQMLFRY
PILALVGGGPDPIYPPNKVMMWDNDESRCYGELVFRSEVRGVRLRGDRIVVVLEHQIFLY
SVTGTLEHQIMTISNPKGLCEVSQSSGHPVLVCPGLHKGQVRVDHYGSKRTIFIGAHNYA
LSCLGLTQDGRLLATASSKGTLIRIFNALDGSLLQEVRRGAERAEIFSLAFSSGAQWLAA
SSDKGTVHVFSVKVDSGSLGGERSGSSSESSHPSLLGISSLSFMKGLSFSGVLPKYFSSE
WSVAKYHLPEGLRYTVAFGHQTNTVVILGMDGSFYRCQFDPVNGGGMTQIEYHNFLKPEE
TSEVV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtctcctcccctccttttcaattcgtccttctagactggactcccgattta
ctcaacacacccaacatggcgcacccgcagcctcagtcacagcagcctcccaattcggcc
tccgattccgaacccggcgactcccactctctctccacccaatacccaagcccaggcccg
aacccgaacccgaaccaaatccccaagatccacaacctgtccttcaaccaggaccacggc
tgcttctccgtcgccacggactccggcttccgcgtctacaactgcgaccccatccgcgag
ctcttacgccgcgattccggtcagcagggcgtcggaatggtccaaatgctattccgctac
ccaatcctcgccctagtcggcggcggtccggacccgatttacccgcccaacaaagtcatg
atgtgggacaacgacgagtcgcggtgctacggcgagctcgttttccgatcggaggtcaga
ggcgtcaggctccgcggcgaccgaatcgtcgtcgttttggagcaccaaatctttctctac
agtgtcaccggaacgctcgagcatcagatcatgaccatctcgaaccccaaaggactctgc
gaggtctcgcagagttcgggtcaccccgtgctggtgtgcccggggctccataagggtcaa
gttcgggtcgaccattacgggtcaaagcggaccatatttattggcgcccacaattatgcg
ctctcttgcttggggctcacgcaggacggccggctgctcgctacggccagcagtaaaggg
actttgattcggattttcaatgctttggatggttcattactacaagaggtgaggagagga
gctgagagagcggagattttcagtcttgctttctcctccggtgcacaatggctagctgcg
tcaagtgacaagggcaccgtccatgttttcagcgttaaggttgattcgggatccttgggg
ggtgagagatcaggcagttcatcagaatccagtcacccgagtctgttgggcatttcatct
ctctccttcatgaaaggtttatctttctccggtgtgctgccaaagtatttcagctcagag
tggtcagtagctaaatatcacttgccggaaggtctgcggtacactgttgcctttggccac
cagacgaacacggtggtgatccttggcatggacggaagcttctaccgatgccagtttgac
cctgtaaacggaggagggatgactcagattgaataccataactttcttaagcccgaagaa
acctctgaagtagtgtaa
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