Malus sylvestris (European crab apple): 126592781
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Entry
126592781 CDS
T09027
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126592781
Membrane trafficking [BR:
msyl04131
]
Autophagy
Other autophagy associated proteins
Others
126592781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
126592781
NCBI-ProteinID:
XP_050114520
LinkDB
All DBs
Position
12:complement(28703343..28705656)
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AA seq
422 aa
AA seq
DB search
MTAVSSPPFQFVLLDWTPDLLNTPNMPHPQPQSHQPPNSASDSEPGDSHSLSTQYPSPGP
NLNPNQIPKVHHLSFNQDHGCFSVATDSGFRVYNCDPVRELFRRDSGQRGVGMVQMLFRY
QILALVGGGPDPIYPPNKVMLWDDNESRCYAELAFRSEVRGVRLRRDRIVVVLEHKIFLY
SITDLTLEHQIVTISNPKGLCEVSQGSGHQVLVCPGLQKGQVRVDHYGSKRTKFIVAHDS
ALSCLGLTQDGRLLATASSKGTLIRIFNALDGSLLQEVRRGAERAEIFSLAFSSGAQWLA
ASSDKGTVHVFSVKVDSGSLGGERSSSSSESSHPSPLGISSLSFMKGLSFSGVLPKYFSS
EWSVAKYHLPEGLRYTVAFGHQKNTVVILGMDGSFYRCQFDPVNGGMTQIEYHNFLKPEE
TS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtctcctccccgccttttcaattcgtccttctagactggactcctgattta
ctcaacacacccaacatgccgcacccgcagcctcagtcacatcagcctcccaattcggcc
tccgattccgaacccggcgactcccactctctctccacccaatacccaagcccaggcccg
aacctgaacccgaaccaaatccccaaggtccaccacctgtccttcaaccaggaccacggc
tgcttctccgtcgccacggactccggcttccgcgtctacaactgcgaccccgtccgcgag
ctcttccgccgcgattccggtcagcggggcgtcggaatggtccaaatgctattccgctac
caaatcctcgctctagtcggaggcggtcccgacccgatttacccgcccaacaaagtcatg
ctgtgggacgacaacgagtcgaggtgctacgccgagctcgctttccgatcggaggtcaga
ggcgtcaggctccgccgtgatcgaatcgtcgtcgttttggagcacaaaatctttctctac
agtatcaccgacttaacgctcgagcatcagatcgtgaccatctcgaaccccaaaggactc
tgcgaggtctcgcagggttcgggtcaccaagtgctggtgtgcccggggctccaaaagggt
caagttcgggtcgaccattacgggtcaaagcggaccaagtttattgtcgcccacgattct
gcgctctcttgcttggggctcacgcaggacggccggctgctcgctacggccagcagtaaa
gggactttgattcggattttcaatgctttggatggttcattactacaagaggtaaggaga
ggagccgagagagcggagattttcagtcttgctttctcctctggtgcacaatggctagcc
gcgtcaagtgacaagggcaccgtccatgttttcagcgttaaggttgattcgggatccttg
gggggtgagagatcaagcagttcatcagaatccagtcacccgagtccgttgggcatttca
tctctctctttcatgaaaggtttatctttctccggtgtgctgccaaagtatttcagctca
gagtggtcagtagctaaatatcacttgccggaaggtctgcggtacactgttgcctttggc
caccagaagaacacggtggtgatccttggcatggacggaagcttctaccgatgccagttt
gaccccgtaaacggagggatgactcagattgaataccataactttctcaagccagaagaa
acatcctga
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