KEGG   Malus sylvestris (European crab apple): 126592889
Entry
126592889         CDS       T09027                                 
Name
(RefSeq) target of rapamycin complex subunit LST8 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    126592889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126592889
Membrane trafficking [BR:msyl04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    126592889
   mTORC2 complex
    126592889
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT140_2nd Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 PROPPIN Nucleoporin_N Beta-prop_IP5PC_F Mala_s_1-like Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd CFAP43_N Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 126592889
NCBI-ProteinID: XP_050114641
LinkDB
Position
12:7415954..7419643
AA seq 326 aa
MSTQEEVKMSQQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLA
AAGNPHIRLFDVNTNSPQPVMSYESHSNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPG
CQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVM
WDGSLVVAANNHGTCYVWRLLRGTQTMTEFAPLHKLQAHKGYYILKCLLSPEFCEPHRYL
ATASSDHTVKIWNVDGFTLEKTLVGHSRWVWDCVFSVDGAYLITASSDTTARLWSMSTGE
DIRVYQGHHKATICCALHDGAEPSAS
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcaactcaggaggaggttaagatgagccagcaaccatcggtgatccttgcaacggct
agctatgatcacactattcggttttgggaggccaaaagtggccgctgctaccgtaccatc
cagtaccctgattcgcaagttaataggcttgagattactccagataaacgcttcctggct
gccgctggaaatcctcacattcgattatttgatgttaatacaaatagccctcaaccggtg
atgagctatgagtcacatagtaataatgtaatggcggtagggtttcaatgtgatgggaac
tggatgtattcaggttctgaggatggtacagtaaaaatttgggatttgagagccccaggt
tgtcaaagggaatatgaaagtcgtgcagctgttaacactgttgtgcttcacccgaatcag
actgaactaatatctggggaccaaaatggcaatattcgtgtttgggacttgacagcaaat
tcatgcagctgtgaattggttccagaggtggatacagctgtaaggtcattaacagttatg
tgggatgggagcttggttgttgcagcaaataatcatgggacatgctacgtttggcgcttg
ttgcggggaacccagacaatgacagagtttgcaccacttcataaactgcaagcacacaag
ggatattacattcttaaatgtctgctttcacctgaattctgcgaaccccacagatacttg
gcgactgcctcttcggaccacactgtcaagatatggaatgtagatggtttcacattagag
aaaactttagtaggtcattcacgatgggtttgggactgtgttttctcggtagatggtgcc
tatcttataacagcttcctctgatacaacagcaaggctttggtccatgtccaccggcgaa
gatatcagggtgtatcaagggcatcacaaagcaaccatttgttgtgcactccatgatgga
gccgaaccttctgcatcttga

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