Malus sylvestris (European crab apple): 126593090
Help
Entry
126593090 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126593090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126593090
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126593090
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
HECT type E3
126593090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
UTP15_C
Motif
Other DBs
NCBI-GeneID:
126593090
NCBI-ProteinID:
XP_050114920
LinkDB
All DBs
Position
12:complement(18962436..18970099)
Genome browser
AA seq
1540 aa
AA seq
DB search
MENRGQKRTELDDELPADKRACNSLEFRASSSNSSAQTHMNSVNSAPETNDHDMDTSSSA
SANSRSEGEHERDSAYGSCDSDDADERHSELKDYQRRRSSGDHGKFKRILSSLSEDTDPS
GQLAVLTELCEVLSFCTEDSLSGMTSDALSPLLVRLAKHETNLDIMLLAIRAITYLCDVY
PKSSGFLVRHDAVPALCQRLMAIEYLDVAEQCLQALEKMSREQPLACLQSGAIMAVLNYI
DFFSTSIQRVALSTVVNICKKLPSECPSPFMEAVPILCNLLQYEDPQLVENVAVCLIKIT
ERVSQSTEMLDELCKHGIIRQVTHFMSLNTRPTLSQPLSNGLMGVLAKLSSGSVVAFRTL
YELNISSILKDILSTYDLSHGMSSNHVVDGHCNQVYEVLKLLNELLPTSTRDQENSQLSD
KESLLVNQPDLLQKFGMDILPLLTQFVNSGANLYICYGCLSVIDKLIYLSTSDMLVELLQ
KANISSFLAGVFTRKDPHVLILALHIAELILQKLSDYFLDSFIKEGVFFAIEALLTPDKC
QLVTLEKCSRLLFPVFSGSQILLDPRQKSTSREVLRCLCYAFATDRSPSVSEKGSCMLEK
DSVYNLAKHIRTKYFAQELYDPEKALTDVLQKLRKFSSAISDLNTSMNNDALDQHEEGFY
SIMRQVMEKLGGVEPISTFEFIESGILRSLLTYLSNGQYLKQKGELSAGNSDIYSVEKRF
EVFARLLFSPLDMITADLPMITLIRKLQNVLSSLENFPVILSNVPKLRSSYATLPYGRRT
TYPCFKVRFVKDKGETHLCDYREGVLTVDPFSSLHAIEEVLWPKVKAKRTSHIKSPTQVK
DQSESLPDQSPSNASSSQGGSPHPMEPESMSTDLPELQEPVEKEAQCASEEDTEMEEQYP
VSCSKEDSSSKLLFYLEGQQLEPSLTLYQAILQQQMNEHEIVIGSKLWSQEYTLTYSKAE
GQYGTRKECLCSAESSAEKVDVHELYTSFFSSMFAYDLASDLEKSSPVYDIIYILKSLER
MNKVIFHLMSRERICAFAKGKINDLDNFQTAVIPVPQNEFVSSKLTEKLEQQMRDALAVS
IGGMPLWCNQLMESCPFLFSFEVKCKYFRLAAFGPLLGQPHSPSYRDSGVTSDRRLSSGS
MPRKKFLVFRNQILDSAAQMMDLHARQKVLLEVEYNEEVGTGLGPTLEFYTLVSHEFQKS
GLGMWRDDRGSFTTGTSHAGDSGILICPFGLFPCPWLGTSDEMQIQFSEVIKKFVLLGQI
VGKALQDGRVLDVHFSKAFYKLLLGKELGVYDILSFDPELGKTLLEFKALVDRKRFSESI
HGESTTLKFDSCFRKTQIEDLCLDFTLPGYPDFILSSRPDHKMVNITNLEDYVSLVADAT
VTAGISRQVEAFKSGFNQVFPIEHLQIFTEEELERLLCGERDSWAFNELLDHIKFDHGYT
VSSPPIINLLEIIHKFDQEQRRAFLQFVTGAPRLPPGGFASLSPKLTIVRKQSSNCADLD
LPSVMTCANYLKLPPYSSQETMKEKLLYAITEGQGSFHLS
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcgaggtcaaaagcgcactgagcttgatgatgaattgccggcagataagcgg
gcgtgcaattcattggagtttagagcgagttcatcaaactcttcagctcaaacccatatg
aattctgtgaactctgcacctgaaaccaatgatcatgatatggacacttcatcctctgct
tcggctaatagtcgctcagagggagaacatgagagggattcagcatatgggtcatgtgat
tcagatgatgcagacgaaagacacagtgaactcaaggactatcagagacggagatcttcg
ggtgatcatggaaagtttaagaggatcttatcgtctttaagtgaagacactgacccttct
gggcagttagctgtgctcaccgagctatgtgaagtcctgtcattctgtacagaggactca
ctatctgggatgacatcagacgcattatcaccgcttcttgttagacttgctaagcatgag
actaacctggatatcatgctattggctataagggctataacttatttatgcgatgtgtat
ccaaaatcatctggcttccttgttaggcatgatgcagttcctgctctttgccaaagacta
atggctattgaatacttggatgtagctgagcagtgtctacaagcattagagaaaatgtca
cgggagcagccacttgcgtgcttacagtctggggcaataatggctgttctgaattatatc
gattttttttcgacaagtatacagagagttgccctttctactgtggtgaacatttgtaag
aaacttccttctgaatgcccttcacccttcatggaggcggtccccatactgtgcaatctt
ctccagtatgaggatccacagcttgtcgaaaatgttgctgtttgcttgattaaaattaca
gaacgagtgagccagtccactgagatgctggatgaactttgtaagcatgggattattcgt
caagtcacacattttatgagcttgaatacccgaccaactttatcccagccgcttagtaat
ggtttgatgggggtacttgcgaaactttcttctggttcggttgtagccttcaggactctg
tatgagcttaatataagcagcatattgaaggatatcttatctacatatgacctctctcat
ggaatgtcctctaatcatgtggtggatgggcattgcaatcaggtatatgaagttttgaaa
ttgctaaatgagcttcttccaacttcgaccagagatcaagagaattcacagttatcagat
aaggaatctcttttagttaatcaacctgatcttctgcaaaagtttggaatggatatactt
ccattgttgactcagttcgtaaactccggtgccaatttatatatttgctatggctgctta
tctgttattgacaagttaatttatttgagcacatctgacatgcttgtagaattgcttcag
aaggccaacatttcaagttttttggctggagtgtttacacgaaaggatccccatgtgttg
atattagctctacatattgctgagctaatcctgcagaaactttctgattatttcttggac
tctttcataaaagaaggcgtcttttttgccatcgaggcactgttaacacctgataagtgt
caattggtaaccctggaaaaatgttcgaggttgttgttccctgtgtttagtggctcacag
attttgttggatcctcgtcagaagtctacttcaagggaggtcctgaggtgcttgtgttat
gcttttgctactgatagatcaccatcagtatcagaaaaaggaagttgcatgcttgaaaag
gattccgtttataatcttgcaaagcatataaggaccaagtactttgcacaagaattgtat
gaccctgagaaagcattaactgatgtccttcaaaagcttagaaaattttcttctgcaata
agtgatttgaacacgtccatgaataatgatgctcttgatcagcatgaagaagggttctat
agtatcatgcgtcaagttatggaaaagcttggtggagtagaacccatttccacttttgaa
tttatcgaatctggaattctaaggtccttattgacttatctgtccaatggccagtacttg
aaacaaaagggggaacttagtgctggtaacagtgatatttattctgtagaaaaaagattt
gaggtgtttgcaaggctattattttctcctttagacatgatcactgcggacctgcccatg
ataacattaatacgcaaactgcaaaatgtgctatcttctttggaaaatttccctgttatt
ttgagcaatgtgcccaagctaagaagttcatatgctacacttccatatgggcgtcgcaca
acatatccatgttttaaagttcgttttgtgaaagacaagggggagacgcatctttgtgat
taccgtgaaggtgttctgactgtggaccctttttcctcattgcatgccattgaagaagtt
ttgtggcctaaagtcaaagcaaaaagaaccagccacattaaatcacctacacaagttaag
gaccaatctgaaagtctaccggatcaatcaccatcaaatgcaagctctagtcaaggggga
agtccacatcctatggagcctgaaagcatgtcgacagacttgcctgagttgcaggaacct
gtggaaaaagaagcacaatgtgcttcagaggaagacactgagatggaagaacagtatcca
gtatcttgtagcaaagaagattcttcttcaaaactgttattttatcttgaagggcaacag
ctggagccgtcattgacattgtaccaagcaattctgcaacaacaaatgaacgaacatgaa
attgtcattggttcaaaactttggagtcaagaatacacattaacatacagtaaggctgaa
ggtcaatacggtacacgtaaagaatgtctttgttcagcagaaagttctgctgagaaagtt
gacgtacatgagttgtatacttcatttttctccagcatgtttgcttatgatcttgcttct
gacttggagaagtcaagtcctgtttatgatataatatacatcctcaaaagcttggaaagg
atgaataaagttatatttcatctgatgtctcgtgaaagaatatgtgcttttgctaaaggg
aaaatcaatgacttggataattttcagacagcagttattccagtgccacagaatgagttc
gtgagcagtaaattgacagaaaaattggaacaacagatgcgggatgctttagcagtgtcc
attggtggtatgcctttgtggtgtaatcagttaatggaatcgtgtccctttttatttagt
tttgaggtcaaatgtaagtacttccgtttggcagcatttggtccactgctaggtcagcct
cattcaccgtcttatagggattcaggggtgaccagtgacaggagactaagctccggaagc
atgcctcgaaaaaagtttttggttttccgcaaccaaattctggattctgctgcccaaatg
atggacctgcatgccaggcagaaggtgctccttgaggtggaatacaatgaagaagttggt
actggtcttggtccaaccttggaattctacaccttggttagtcacgagtttcagaagtct
ggtctaggcatgtggagagatgatcgtgggtcttttaccactggtacaagccatgctggg
gacagtggaattttgatatgtccttttggtcttttcccctgtccatggttgggtacatct
gatgagatgcagatacagttcagtgaagtaattaagaagtttgtccttttggggcaaatc
gtaggaaaagcgctccaagatgggcgtgtcttggatgtgcatttctccaaagccttctat
aaacttcttcttggcaaggaacttggtgtgtatgacatcctgtcatttgatcctgagctt
ggcaagacactgctagagtttaaggctctcgtagacaggaaaagattttcggagtccatt
catggagaaagtacaacattgaaatttgactcatgctttcggaaaacccaaattgaggat
ctttgtcttgattttacacttcctggctatcctgattttattctttcttctaggcctgat
cataaaatggtaaatattacaaacttggaagattatgtttcacttgtggcggatgcaact
gtaactgctggaatttctagacaagtggaagctttcaaatctggctttaaccaggttttc
cctattgagcatcttcagattttcaccgaagaagaattagagcgtttattatgtggagaa
cgtgattcttgggctttcaatgagctccttgatcatatcaaattcgaccatggttacaca
gttagcagtcctcccattatcaatttgctggaaatcatacacaagttcgaccaagaacag
cgaagagcgtttttgcaatttgtgactggggcacctcgcttacctcctggaggttttgca
tctctcagtccgaagttaactattgttcgaaagcaatctagcaactgcgcagacttagac
ctaccaagtgtgatgacctgtgcaaattatcttaagctgccgccttactcttcacaagag
acgatgaaagagaagctcttatatgccattacagaagggcagggatcgttccacctttcg
tag
DBGET
integrated database retrieval system
