Malus sylvestris (European crab apple): 126593108
Help
Entry
126593108 CDS
T09027
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126593108
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126593108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
T6SS_VipA
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
126593108
NCBI-ProteinID:
XP_050114949
LinkDB
All DBs
Position
12:32526429..32539238
Genome browser
AA seq
1140 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMEGVVYSTSQFGLDERFGDGDTSQIGLEFDEDL
FFGKVSAQGNDGISDGDPQTLGQSVTRLEKHDMYEGIPGTSETMQMNGIESQNEVLAANT
DFVTYAQAPSTPGLFEEPNLFAVQEPMACNDQLDFEDHNLSNLASVGSSENAGSMSGPRC
GDDSTKVNGYHLGDIDIKQAKPQEHDQIKPLSPVLECSKGTVGALDGRNRVEDIHNGIVI
NNEPLMPCLDQKDDQHVEPAGVRLDETDASPSCSQVTSELDDPSRKICASSNFPRVSEDY
LEYQQTYLKPEIQNDVEIANNMGESCTPIITDPLKPVMYEDTAAAEVPVLRACSSLPSHH
DMLSPTDKISEVPCNLPSEVVVPSSLDNATSLETQLENLDRSAASNLPAPEKLLSVPEGF
TSKPSDFIVETTPEKEVIVGDAGDGDGIKFISGKKRSSTESTMTVQSLNSVESLGVAREE
RTAESIPDDDDLLSSILVGRRSSVLKMKPTPPALQIMCTKRSRTAVRGTSSKRKVLMDDT
MVLHGDQIRQQLTNTEDIRRVRKKAPCTRPEISIIQRQFLEDAIFTEPIFTGMSAELIYL
HTEAFDPSTTRVSENDQNNASMEPLKDVASSLEPNATKEIEPLRSTEPLIARDDTAAQPA
DIEDENQKEDHNLRSHHIDAEEQRISDLEELNTSKHEPLGDIAEMEIDKENFEVADPVLE
DIYKVSAEVNVQSRLTDKTEENASLQIDALFGSLDNKLDAEPMGVDALIVESSIQKEVDA
IEVVDRSVEIRADVQIGASELTDSVNVTLATGECKNLRFSTDQSVGEIENSKQHTVNETE
VLEENLHCDDNPNSYCIHGEDNENASWNGKENLGCREVGPHSGIDAEVTADPLPEDRGDY
EDVAFGDDTEFLNVDDDEIAEDVDDMPCAGDTRLLENSGWSSRTRAVAKYLQTLLYKEPV
HGKKFLGMDSLLNGKTRKEASRMFFETLVLKTRDYIHVEQAKPFDNVYIGPRVKLMKSEF
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttttattctcagtttatattggccaagaaaggtcctcttggaacgatatggatagcg
gcacatttggagcgcaagcttcgcaagaatcaggtcgccgacaccgatattggcgtctcc
gtagattctattctttttcctgaagttccgattgctctccggttgtccagccatcttctg
cttggtgtggtgaggatatattctagaaaggtgaattacctgtttgatgattgtagcgag
gctttgcttaagataaagcaagcttttcgctccactgcagtcgatttacctccagaagaa
tctactgctccgtatcattccataaccttgcctgagacgtttgatcttgatgattttgag
ctaccagataatgaaatttttcagggtaactatgttgaccatcatgtcagtacaagggag
caaataactctccaagatacaatggagggtgtggtttactcaacatctcaatttggattg
gatgagcggtttggtgatggcgatacttctcaaattggtctggaatttgatgaggacctg
ttttttggcaaggtttcagctcaagggaatgatggaatttcagatggtgatcctcagaca
ttgggccaatcagtaacacgtttggaaaagcatgatatgtatgaggggatacctggaact
tcagaaaccatgcaaatgaatgggattgaaagccagaatgaagtcctggctgcaaatact
gattttgtcacatatgctcaggctccatcaactcctggactatttgaagagccaaacctg
tttgctgttcaggaacctatggcctgcaatgatcagttggattttgaagaccataattta
tcaaacttagcatccgtgggcagctcagaaaatgctggtagtatgtcaggtccgcgttgt
ggggatgatagtaccaaggtgaatggctatcatttgggcgatatagacatcaaacaagca
aaaccacaggagcatgaccaaattaaacccctttctccagtattggaatgttcaaagggg
acagttggtgcattggatggccgaaacagggtggaagatatacataatggtattgtgata
aacaatgaaccacttatgccctgcctagatcaaaaggatgaccaacatgtagaacctgct
ggagttaggttggatgaaactgatgcatctcctagctgctcccaggtcacatctgagttg
gacgacccttctcgtaagatctgtgcaagtagtaactttccgagagtatcagaggattat
ttggagtatcaacagacatatttaaagcctgaaatacagaatgatgttgaaattgctaat
aatatgggagaatcatgcacacctatcattacagatcctttgaagcctgttatgtatgaa
gacacagcagctgctgaagtgcctgtgctccgggcatgcagctccctcccaagtcatcat
gatatgctatctcctaccgataaaatttcggaagtcccttgcaacttaccatctgaggtt
gtagtgccaagttcattggacaatgcaacatctttggagactcaattggagaacttggat
agatctgccgcttctaacttgcctgcacctgaaaagttgctctctgtaccagaggggttc
acttctaaaccaagtgattttatagtggaaactacgcctgaaaaagaagtcatagttggg
gatgctggtgatggtgatgggattaaattcatatcagggaaaaaacgtagttccacagaa
agtacaatgacagtgcagagtttaaattcagttgaatcacttggggtggcccgagaagag
agaaccgcagaatctatccctgatgatgatgatttattgtcttctattttagttggaaga
aggtcttcagttctaaaaatgaaacccactccgcctgcacttcaaataatgtgcacaaaa
cgctcaagaactgctgtccgcggtacctcttcaaagaggaaagtgctaatggatgataca
atggttttgcatggcgatcaaatacgccagcagttgacaaatactgaagacatacgtcgt
gtgcgaaaaaaggctccttgtactcgcccagaaatttcaattattcagcgacaatttttg
gaagatgcaattttcactgaacccatatttactggcatgtcggcggaactgatatatctg
cacactgaagcatttgatccgagtacaacccgggtttctgaaaatgatcaaaacaatgct
tctatggagccattgaaggatgtagcatcctctctggagccaaatgctactaaagaaatt
gaaccccttcgaagcactgaacctttaatagcgagagatgacacagcagcacagcctgct
gacattgaggatgaaaaccagaaggaagatcataacctaaggtctcaccatattgatgct
gaagaacaaaggatcagtgacttggaagaacttaatacttccaaacatgaacccttggga
gatatagctgaaatggaaattgacaaagaaaattttgaagttgctgatcctgttttagaa
gatatttacaaggtgtcagctgaagttaacgtccagtcaaggcttacggataaaactgag
gaaaatgcgtcactgcagatcgatgcattattcgggtcactggacaataagttggacgcc
gaacccatgggggtggacgcattgatagtggagtcaagtatccagaaagaagttgatgcc
attgaagttgttgaccgcagtgtcgaaatcagagcagatgttcagataggtgcatctgaa
cttaccgacagtgtaaatgttacgcttgcaactggggaatgcaaaaaccttcgtttttca
actgatcaatctgtgggagaaattgaaaacagcaagcaacatactgtgaatgaaactgag
gtcctggaggaaaacttgcattgtgatgacaacccaaactcttattgtattcacggtgaa
gacaacgagaatgcttcctggaatggtaaggaaaatctaggttgccgggaggttggtcca
catagtggtattgatgcagaagtcactgcagacccccttccagaagatcgtggtgattat
gaagatgtagcttttggagatgacacagaatttttgaatgtagatgatgatgaaatagct
gaagatgtcgatgacatgccatgcgctggagatactcgtcttcttgagaatagtggatgg
tcttcccgcaccagggctgttgctaagtatctccagactttactttataaggaacctgtg
catgggaaaaagtttcttggcatggacagtttattaaatggtaaaactcgaaaggaagca
tcaaggatgttttttgaaacattggtgcttaagacaagggattatatccatgtggaacag
gcaaagccttttgacaacgtctacataggacctcgagtaaaactcatgaaatcagagttc
taa
DBGET
integrated database retrieval system
