Malus sylvestris (European crab apple): 126593189
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Entry
126593189 CDS
T09027
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126593189
03036 Chromosome and associated proteins [BR:
msyl03036
]
126593189
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
126593189
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126593189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CTD2
Motif
Other DBs
NCBI-GeneID:
126593189
NCBI-ProteinID:
XP_050115073
LinkDB
All DBs
Position
12:31432547..31442838
Genome browser
AA seq
1445 aa
AA seq
DB search
MEESHEQVGEQMEENGEQVENIGSASSGSDSDSFIDDSEVDEVPISGEDGKLQPEEPLSD
KEIEELIAEFLEVESKAAEAQEALEKESLAKVESEVREELAQTLHGDDLEAAVANEMDTL
IEEWQAELDELETESAHLLEQLDGAGIELPSLYKCIESQAPNGCCTEAWKRRIHWVGSQE
TGEFTESRADAEKYLQTHRPVRRRHGKLLEDGASGFLQKKLVVDGIKDVETAEVDYWGSF
NKLFSDGATAGGASFGSKHWASVYLASTPQQAAEMGLKFPGVDEVEEIDDIDGNSGDPFV
ADAVANERELDLTEEQKKNYRKVKEEDDVNVDRKLQIRLKRRRHRKRRKQFEKIDEDLEI
ANNIDQESITSNGASPVTSSSEARGSKRLSEDEELNIDNKRSRTVLIDSDDDTPLKDNSD
CNAIKSEDQSYVEENICISASGGLPSQSLNDKLYCTACSKHALKVCSHPLLKVIVCADCR
CLLEEKMHVKDPDCTKCYCGWCGQSKDLVNCNSCKTLVCTTCIKRNIGEECLSDAQTSGW
QCCFCCPSLLKTLTSQLEQAIGCGDLIDSSSDSDSDSSGSEIDVTVSSKRRRKQKIRRII
DDTELGEETRRKIAIEKERQERLMSLQVQFSAKSKMKSSATCNGRLPEGANTEVLGDASV
GYVVNVVREKGEEAVRIPPSISAKLKAHQITGVRFMWENIIQSVRKVKAGDKGLGCILAH
MMGLGKTFQVIAFLYTAMRSIDLGLKTALIVTPVNVLHNWRQEFMKWRPSELKPLRIFML
EDVSRDRRAELLAKWRRKGGVFLIGYSAFRNLSFGKHVKDRQIATEICRALQDGPDILVC
DEAHVIKNTRADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN
RFQNPIEYGQHTNSTVDDVKIMNQRSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVIAVK
LSTLQRKLYKRFLDVHGFTKDNDYNEKIGKRSFFAGYQALAQIWNHPGIVQLRKDNKDYE
RSGDAVENFLADDSSSDENIDYNLGLGEKNVNEILPGKKDGIFHKNWWNDLLHENNYKEL
DYSGKMVLLLDILAMSSDVGDKALVFSQSIPTLDLIELYLSRLPRHGKKGKSWKKGKDWY
RLDGRTEGSERQKLVERFNDPLNKRVKCVIISTRAGSLGINLYAANRVIIVDGSWNPTYD
LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM
LHLFEFGDDENHELDQDNGRMNDNMTGEVEILPKHVVPLSQGSCSSDKLMERLIGKHSPR
WIANFHEHETLLQENEEERLTKEEQDMAWEVYQKSFGWEEVQRIPLKESAIDQKPAASNT
ASSAPKKSILAESKAKNAFVQRKCTNLSHLLTLRSQGTKQGCTTVCGECGRELSWEEHNR
DSRLR
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagccacgagcaagtgggggagcaaatggaggaaaacggcgagcaagtggaa
aatattgggagtgcttctagtggcagtgatagtgattctttcatagatgactcagaagtt
gatgaagtaccgatatccggcgaagatggaaaattgcagccagaggaaccattatctgat
aaagaaatagaggagcttattgctgaatttttggaggttgagagtaaggctgcagaggct
caagaggcacttgagaaagagtctcttgccaaggtggagagtgaagtaagagaggagttg
gcacaaacccttcatggagatgatttggaagcagctgttgcgaatgaaatggatactttg
atagaagagtggcaagctgagcttgatgaacttgagactgagagtgctcatttgttggaa
caacttgatggggccggcattgagctaccaagcctttataaatgcattgaaagtcaggct
cctaatggttgctgcactgaagcttggaaaagacggatacactgggtaggatctcaagag
actggcgaatttaccgagtcaagggctgatgcagagaagtatctccaaacccacaggcct
gtgagaaggcgacatggtaaactattggaggatggcgctagtggatttctgcagaaaaaa
ctagtcgtagatggaatcaaggatgttgagacagctgaggttgattactggggttctttt
aacaaattattttctgatggtgcaactgcgggtggtgcctcgtttggcagtaagcactgg
gcttctgtttatttggccagtacgccacagcaagctgctgagatgggactcaagttccct
ggggttgatgaggtagaggagattgatgacattgatggcaattcgggtgatccatttgtt
gcagacgctgttgcaaacgaaagagaactggatctcactgaagaacaaaagaaaaattat
aggaaggtcaaagaagaagatgatgtaaatgttgatcggaagcttcaaattcgtttgaaa
cgaaggagacatcgaaagagacgtaaacagttcgagaaaattgatgaagatctggaaatc
gctaataacattgaccaagaaagcataacgagtaacggtgcatctccggtgactagttcc
agtgaagcaagaggctccaagcgtctgagtgaggatgaggagctaaacattgataataag
aggagtcgaactgtactaatagatagtgatgatgacactccactgaaagataattcagac
tgcaatgcaataaaatccgaggaccagtcctatgtggaagaaaatatctgcatatctgcc
agtggtggtcttccttcacagagtctgaatgataagctctactgcactgcttgcagtaag
catgctctcaaagtgtgttcacatccacttctgaaggtgattgtttgtgcagattgcaga
tgtttattggaagaaaagatgcatgtgaaggatcctgattgcactaagtgttactgtggg
tggtgtggacaaagcaaggacctagtaaattgtaactcttgcaagacgttggtttgtaca
acttgtataaagaggaatattggagaggaatgcttatctgatgcccagacctctggctgg
caatgttgtttctgttgcccaagtcttctaaagacattgacgtcacaattagagcaagca
ataggttgtggggatttgatagattctagctctgatagtgattcagatagttcaggttca
gagatagatgttactgtaagttctaagaggaggagaaagcagaaaattcgaaggatcatt
gatgacactgaattaggagaagaaaccagaaggaaaattgcaattgaaaaggaacgtcaa
gagcgcttgatgtctttgcaagtacaattttctgccaaatctaagatgaagagctctgca
acctgtaatgggagattacccgaaggcgccaacactgaagtgctaggtgatgcatcggtt
ggttatgtagtgaatgttgtgagggagaaaggtgaagaagctgtcagaattcctccaagc
atctcagctaaattgaaggctcatcagattacgggtgtgagatttatgtgggagaatatc
atacagtcagtcagaaaagtgaaggctggggataaaggtcttggttgcattctagctcac
atgatgggccttggtaaaacttttcaggtcatagcttttttgtacactgcaatgagaagt
attgatttgggattaaaaaccgcacttattgtcacccctgtgaacgtgctgcacaattgg
cgtcaagagttcatgaagtggagaccttcagaactaaagcctcttcgcatcttcatgcta
gaagatgtgtcaagggatagaagagcagagttgcttgcaaagtggagaaggaagggtggt
gtttttctaattggctactctgcttttagaaacttatcctttgggaagcatgtgaaggat
aggcagatagctacagaaatttgtcgtgccttacaggatggaccggatatacttgtttgt
gatgaggcccatgttattaagaataccagggctgatgtaacccaagccttaaaacaagtg
aaatgccagagaaggatagcattaactggatcaccacttcagaacaatctcatggaatat
tattgtatggttgattttgtaagggaaggttttcttggaagcagccatgagtttcggaat
cgattccaaaatcccatagagtacggtcagcatactaattcaaccgtggatgatgtgaaa
atcatgaaccaacggtctcatattctttatgaacagttgaaaggatttgttcagagaatg
gacatgactgttgtgaagaaggacttaccaccaaaaactgtgtttgtaatagctgtgaaa
ctttcaaccttacagaggaaattatacaagagatttcttgatgtccatggatttaccaag
gacaatgattataatgaaaagatagggaagagaagtttttttgccggctaccaggcctta
gctcagatatggaaccatccggggattgtgcaactaagaaaagacaacaaagactatgag
agaagtggagatgccgttgagaattttcttgcagatgacagctctagtgacgaaaacatt
gattataatttgggtttgggagagaaaaatgtgaatgaaattttgccaggaaaaaaagat
ggcatttttcataagaattggtggaatgatcttcttcatgaaaataactataaagagctt
gattacagtggcaaaatggtactcctgcttgacattctagctatgagttctgatgtgggc
gataaggcattggtatttagccagagcataccaaccctagaccttattgaactttatctt
tcaaggctacctcgacatgggaagaaagggaagtcctggaagaaaggaaaagattggtac
aggctagatgggagaacagagggctcagaaaggcaaaagctggttgaacgctttaatgat
cccctaaataagagggtgaaatgtgttataatttccaccagagctggatcattagggata
aatctatatgctgctaatcgcgtaataatagttgatggttcttggaatccaacatacgat
cttcaggctatatatcgtgcttggaggtatggccaaacaaagccagtgttcgcttacaga
ttgatggcacatggaactatggaagaaaaaatttataagcgtcaggtaacgaaggagggc
ctggctgcaagggttgttgaccgacaacaggtacataggacaatatctaaggaagagatg
ttgcatctttttgaatttggtgatgatgagaaccatgagcttgaccaagataacggacgc
atgaacgacaatatgactggtgaagtggaaattttgccaaaacacgtagttcctctttct
caaggaagttgctcttctgacaagctcatggaaaggttaattggcaagcattctccaagg
tggatcgcaaatttccacgaacatgagacccttttgcaagagaatgaagaagaaaggctc
acaaaggaggagcaagacatggcctgggaagtataccagaaatcatttggatgggaggaa
gtgcagagaattcctctcaaagaatctgcaatcgaccaaaaaccagctgcatcaaatact
gcgtcatctgcaccaaagaaaagcatccttgctgaatccaaggcgaagaatgcttttgtg
cagcggaagtgcactaacctttcgcatttgctgacgctaagaagtcagggcacaaaacag
ggttgcactactgtgtgtggggaatgtggccgagagctaagctgggaggagcacaatcga
gatagcaggctcaggtga
DBGET
integrated database retrieval system
