Malus sylvestris (European crab apple): 126593251
Help
Entry
126593251 CDS
T09027
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
126593251
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
126593251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
126593251
NCBI-ProteinID:
XP_050115210
LinkDB
All DBs
Position
12:complement(31948947..31951527)
Genome browser
AA seq
684 aa
AA seq
DB search
MLSMEKVTQMRRWVILGVLALALLGLLFFFPINNGAYETTRISGRRALRSVTGNELNFNQ
MLTEQTQNTVELNNGIVRVTFSNPGGDVIGIQYKGIDNLLDIKNPPSNRGYWDLVWKNGE
DRLQGTTFKIVTSTADQIEISFNKTYDVSLGDWTLPLNVDKRYIMQRGRAGFYAYAIYER
LEGWPELRIDQTRLALKLRQDKFQFMAISDDRQRFMPTAEDRKGDHSQTLAYREAVLLTN
PSNPEFKGEVDDKYQYSNDVKDIKVHGWISTDDAIGLWMITPSIEFRSAGPFKQELTSHV
GPTALTVFLSSHYVGKDVGLTFADGEAWKKVFGPVFVFLNSDVPSSNASFSLWENAKEQM
YEEVKSWPYNFTQSEDFPNSDERGSVAGQLLIRDSYINESLVSASYAYVGLAASGYAGSW
QTECKGYQFWTQADKQGYFYVKDVRPGNYSLYATVPGFIRDYKYEYDITIEAASEVSLAN
LTFEPPRNGPTLWEIGTPDRSAAEFNIPDPYPTLVNRLFTGNYANRFRQYGLWERYGDYY
PDRDLIYTVGTDNYRDDWFYAHVTRNRNGTYEATTWQIVFQLENVWNTGNYMLQLALASA
NYAELQVRFNNRNDAPHFSTGLIGKDNAIARHGIHGLYWLFSVDVPSYRLQQGYNTIYLT
QSRNWGPFAGLMYDYIRLEGPPPN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgatggagaaggtgacgcaaatgaggagatgggtgatccttggagtattagca
ctagcattacttggtttgctcttcttcttccctattaacaatggtgcatacgagacgacg
aggatttctggaaggcgagcactcaggagcgttactggcaatgagctcaacttcaaccag
atgctaacagagcaaactcagaacacggtagagctgaacaatggcattgtccgggtcact
ttttcaaatcccggaggagacgtcattggaatccaatacaagggaattgacaacttgctt
gacatcaaaaaccccccaagcaatagaggttactgggatcttgtatggaaaaacggcgag
gacagactacaaggaacaacatttaagattgttacatcgacggcggatcaaatagagatt
tcttttaataaaacttatgatgtttccctcggagattggacgctacccttaaatgttgac
aaaaggtacataatgcagcgtggtcgcgctgggttctacgcgtatgccatatacgagcgt
ctagaagggtggccggaattgcgcatagatcaaacaagacttgctttgaaacttcgacaa
gataaatttcagttcatggctatatcagacgacagacaaagattcatgccaacagccgaa
gatcgcaaaggagaccactctcagacccttgcctatcgtgaagctgttcttttaacgaat
ccaagcaatcccgagtttaaaggagaggtggatgacaagtaccaatactccaatgatgtc
aaagacattaaggttcacggttggattagcactgacgatgctatagggctttggatgatc
acacctagtattgagtttcgttcagcggggccattcaagcaggaacttacctctcacgtc
ggcccaactgccctcactgtgtttcttagtagtcactacgtcggcaaagacgttgggttg
acctttgcagacggtgaggcatggaagaaggttttcgggcccgtctttgtgtttcttaac
tcagacgttccaagctcgaatgcgtccttctctctctgggaaaatgcaaaagaacagatg
tatgaagaagtaaagagttggccatacaatttcactcagtccgaagactttcctaactcc
gatgaacgcggatcagtggctggtcagttactaatacgggattcgtacatcaacgagagc
ctagtctcagcaagttatgcttatgtgggactggctgcgagcggatacgcgggatcatgg
caaacggaatgcaagggttatcagttctggactcaagctgacaagcaaggttatttctac
gtgaaagatgttcgaccggggaactatagtttgtacgcaactgttcccggcttcattagg
gactacaaatacgagtacgatattacaattgaagcagcaagtgaagtcagtttagctaat
cttacctttgaacctccgagaaacggtccgaccttgtgggaaatcggcacccccgatcga
tcagccgcggagttcaacataccggatccatatccaacccttgtgaaccgattgttcact
ggtaattacgcaaacaggtttaggcaatatggcttgtgggaacgatacggagattactac
cctgaccgtgatctcatctacaccgtcggcactgacaattacagagatgattggttttac
gctcatgtgacaaggaacagaaatggtacatacgaggcaacgacatggcaaattgtattt
caacttgagaacgtttggaacaccggaaattatatgctccaactggcgttggcctcggcc
aactacgcagaactgcaggtccgattcaacaaccggaatgacgcacctcatttttcgacg
gggctaatagggaaggacaatgccatagcaaggcatggaattcatggtttgtactggctc
ttcagtgtcgatgtgccgagctatcgacttcaacaaggatacaacaccatatatcttact
caatcaagaaactggggacctttcgcaggacttatgtacgattacatccgactggaagga
cctcctccaaactga
DBGET
integrated database retrieval system
