Malus sylvestris (European crab apple): 126593574
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Entry
126593574 CDS
T09027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126593574
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126593574
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Pre-60S particles
Helicases
126593574
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF87
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126593574
NCBI-ProteinID:
XP_050115632
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All DBs
Position
12:complement(11063490..11077734)
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AA seq
851 aa
AA seq
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MAPPPLSRGLKRKAKKLKIQKQDAELERFDSLPWNPSLPNDDNAFSQVVGNNELEGGFLM
LEEIDEAAYGFEIPEPQVANRNSKEDSKQREKSKKRKRSSGVDGGAGDGVEADGERILGK
DDSELNKKKKKKQKQKKKKKPDQAQRIENVDGNGDNEFEDKSKDENVNSKKKRKRKTLTK
KKNNAKKTLENVESTVDDDSKGKKEIDKESFDEDEYYAWHELRLHHLIMKSIYRLGFKNP
TPIQKACIPAAAHQGKDIVGAAETGSGKTLAFGLPILQRLLDEKEKAVRMFDEKGEEAEK
FAPKGLLRALVITPTRELALQVSDHLKAVAKDTDIRVVPIVGGMSKEKQERLLKARPEIV
VGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHFHEMQSIIDMLPVRNTSTES
HSENAQNSVAMSNFQRKKRQTFVFSATIALSPDFRKKLKRSSQKTNQSMSDGVNSIEALS
ERAGMRDNVSVIDLTNTSILANKLVESFIECREEDKDAYLYYILSVHGQGRTIVFCTSVA
ALRHISSLLCILGINVWTLHAQMQQRARLKAIDRFRGFEHGLLVATDVAARGLDIPGVRT
VVHYQLPHSAEVYVHRSGRTARASADGCSIALIAPNETSKFASLCKSFSKESFQRFPMDS
SYMPEVMKRLSLARQIDKIMRKDSQEKSKKNWVERNAELIELVVDHDDSEEERVKSHKQK
KASSASLKKLQQELKMLLSRPLQPKSFSHRYLTGAGVSPFLLHQFEELAKQKFGDGSDSG
DKKRSKLVVIGQDCVEPLQALRSAGHEVHIDGKEVAQKRRNMVTLRRKRKEEKTRLRDQR
RKRKKQMKGGD
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaccccctctctcgcgcggattgaagagaaaagccaagaagctgaaaattcaa
aagcaagacgcagagctcgagcgcttcgattcgctcccatggaacccctctctccccaac
gacgacaacgccttctcgcaagtggtcggcaacaacgagctcgaaggaggtttcctaatg
cttgaggagattgacgaggccgcatatgggtttgaaattcctgaaccacaagtagcaaat
aggaatagcaaggaagacagtaagcaaagggaaaagtccaagaagcggaagcgcagcagt
ggagttgatgggggtgctggtgatggggttgaggcggatggcgaaaggattttgggcaag
gatgatagcgagctaaataaaaagaagaaaaagaaacagaaacagaaaaagaaaaagaag
ccggaccaagctcagagaattgagaatgttgatggaaatggtgacaatgagtttgaagat
aaaagcaaggatgagaatgtgaattctaagaagaagaggaagaggaagacgttgacgaag
aagaagaacaacgccaagaagaccctggaaaatgtggagagtacggttgatgatgatagc
aaaggaaaaaaagaaattgacaaagagagttttgatgaagatgagtattatgcatggcat
gagttgagactccatcatctgatcatgaaatcaatatataggcttgggttcaagaaccca
acgccaatacaaaaagcttgtattcctgctgctgctcatcaagggaaggacattgttggt
gctgctgaaacagggtctggaaagacacttgcttttggtttgcccattttgcaacggtta
ttggatgaaaaagaaaaggctgtaaggatgtttgatgaaaagggggaggaagcagagaag
tttgctccaaaaggtcttttacgggcccttgtcattactcccacaagggaacttgcactt
caggtctctgatcatcttaaggcagttgccaaggatactgatattagagtggttccaata
gttggagggatgtcaaaggaaaaacaggagagacttctaaaggctagacctgagattgtt
gttgggactccagggagattatgggaacttatgtctggtggagaaaagcatctagttgag
ttacattcgttgtctttctttgtgctggacgaggctgatcgaatgatagaaaatggtcat
tttcatgaaatgcagtcaataattgacatgcttccagtgaggaatacatcaactgaatcc
cattctgaaaatgcacaaaattctgttgcaatgtccaacttccagaggaagaaaagacaa
acatttgttttctctgctactatagcactttctcctgatttccgtaagaagttaaagcgt
agttcacaaaaaaccaaccaatcaatgtccgatggggtgaattctatagaagctctaagt
gagcgagcagggatgagagacaatgtttccgtcattgatctgacaaatacatccattttg
gcaaataagcttgtggagtcatttattgaatgcagggaagaagataaagacgcctacctg
tattatattttaagtgttcatggacaaggccgcacaattgtattttgtacatcagttgca
gctttgcgacacatatcatcactcctgtgcattcttggcatcaatgtctggacacttcat
gctcagatgcagcagcgagctcgcttgaaggcaattgatcgttttcgtggatttgaacat
ggtttacttgtggctactgatgttgcagcaagaggcctggatattcctggtgttcgaact
gttgttcactaccagcttccacattcagcagaagtttatgttcacagaagtggtagaact
gctagagcttctgctgatgggtgcagcattgcactaattgcaccaaatgagacctccaaa
tttgcttctttgtgcaaatcattttctaaggaaagttttcagcgatttcccatggacagc
tcatacatgcctgaggtcatgaaacggttatctcttgcacgtcaaatagacaagattatg
cggaaagattcccaggagaaatcgaagaaaaattgggttgaaagaaatgcagaattgatt
gaattggttgtggaccatgatgacagtgaggaggaaagggtgaaaagtcataagcaaaag
aaagccagctctgcgagtttaaagaagttgcagcaggagctcaagatgttactttcgcga
ccattacaaccgaagtcattttcacatcgttatttgacaggggctggtgtgtcacctttc
ctgctacatcaattcgaagaattggctaagcaaaaatttggtgatggcagtgactcggga
gataagaaaagaagcaaattggtagttattggtcaggattgcgtggaaccactccaggca
cttcggagtgctgggcatgaggtacacattgatgggaaagaggtggctcaaaagcgaaga
aacatggtgactctgaggaggaaaagaaaagaggagaaaacacgtttgagagatcaacgg
agaaagcggaagaaacagatgaagggaggagattga
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