Malus sylvestris (European crab apple): 126593715
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Entry
126593715 CDS
T09027
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126593715
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126593715
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126593715
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126593715
03041 Spliceosome [BR:
msyl03041
]
126593715
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
126593715
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
126593715
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126593715
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126593715
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126593715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
126593715
NCBI-ProteinID:
XP_050115777
LinkDB
All DBs
Position
12:31043605..31047963
Genome browser
AA seq
342 aa
AA seq
DB search
MDQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSKEIFLQQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECATINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLD
QIRNLTRPTDVPETGLLCDLLWSDPSKDVQGWGRNDRGVSFTFGPDTVTEFLQKHDLDLV
CRAHQVVEDGYELFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPK
FNFGSMTTAKPGNTSSGVSAFASTATAKPGNTVTGIRSMMHR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatcggttctggacgacataatcaaccgacttctcgaagtccgaggccgaccc
gggaagcaggtccagctgtcggagtctgagatccggcagctttgtctggtgtctaaagaa
atcttcttgcagcagcctaatttgttagagcttgaagcacccatcaagatttgtggtgat
atacatggtcagtactccgatcttttaaggcttttcgagtacggtggactacctcctaaa
gccaattacttgttcttgggggattatgtggatcggggaaagcaaagtttagaaacaata
tgtcttctccttgcatataaaataaaatatcctgagaattttttcctcttgaggggaaac
catgaatgtgcgaccataaaccgtatatacggattttatgatgagtgtaagagaagattc
aatgtgaggctatggaagacattcacagattgttttaactgccttccagtggcagctctg
attgatgaaaagattctctgcatgcatggcggtctttctcccgacctgcataatttagat
caaatcagaaatttaacgcggccaacagatgtaccagagacaggtttactctgtgacctt
ctctggtctgatcccagtaaagatgttcaaggttggggaaggaacgaccgtggagtttcg
tttacatttggtcctgacacagtgacggagtttcttcagaagcatgatttggatctcgtt
tgtcgtgctcaccaggttgtggaggatggctacgagttatttgccaaccgccaacttgtg
acgatattttcagcacctaattattgtggggaatttgataatgccggtgccatgatgagt
gtggatgagacattaatgtgctcttttcaaatactaaaacctgcagataaaaagccgaaa
ttcaattttgggagcatgactacagctaagcctggaaatacttcgtctggagttagcgct
tttgcgagcacagcaacagctaagcctgggaacactgttacaggaatcaggtccatgatg
cacaggtaa
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