Malus sylvestris (European crab apple): 126593771
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Entry
126593771 CDS
T09027
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126593771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126593771
03036 Chromosome and associated proteins [BR:
msyl03036
]
126593771
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126593771
Coactivators
SAGA/TFTC/STAGA complex
126593771
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126593771
STAGA complex
126593771
TFTC complex
126593771
SAGA complex
126593771
SLIK complex
126593771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
126593771
NCBI-ProteinID:
XP_050115843
LinkDB
All DBs
Position
12:complement(2213255..2218581)
Genome browser
AA seq
570 aa
AA seq
DB search
MDQQNSTTTPTPSTSQPPTESPPTAQSQPPPQPQPPPPSSLPTTPTSTPTPPPPNPNPNP
KTSTPLPQQPLHQPQPPPQSLPLPSQPRTPSTLARPPPWQQSHFHHFPSPSSSASSGPPP
PPPPSASQPPPPRGGIAIGVPAHHTGPSPPQPTPYSSSYGHHFGGMGRGGVSVPESVSNS
SPSQVRPSMQGMGMMGSLGSSSQMRPTGIPAHHPQRPVQSSVRPPSTASNQSPSSQNFQG
HSLLRVSSVGSGSSPNTSPGLQPHTQPWLSSGSQGKPPMPSPSYRQQMNSPSMQQRSHLP
QQQPHPTAPQQQHHSMPSASQQQHHPLPSASPQQHHPMPSASQQQHTSSAQHQQPSSSHQ
GPEHFGQQVQPSRVPQTMPRQQQITRVQGPVNPKSSTLVAAQPNTVQSGAQNKTPSPETD
ESCNRILGKRSIRELVNQIDPSEKLDPEVEEILMDIADEFVDSITTFSCSLAKHRKSTQL
EAKDILLHIEKNWNITLPGFGGDEIKGFRKPLTNDMHKERLAVIKKSIVATETANARNPT
GQATGNAKGGLVKTPANIISSQNSNMREVT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacagaactccaccaccaccccaactccctccacctcccaaccacccaccgaa
tcacccccaaccgcccaatcccagcctccacctcagcctcagccaccgccgccctcctcc
ttaccaactactccaacctccaccccaaccccccctcccccaaaccctaaccctaaccct
aaaacctccaccccattaccccaacaaccactacatcaaccgcaaccaccaccccagtcc
cttccactcccttcgcagcccaggactccctccacattggctcgtcctcccccctggcag
cagtcccacttccaccacttcccttcgccttcttcttccgcttcgtctgggcctcctcct
cctccgccgccttcagcctcccagcctcccccgccgaggggcggcattgccattggtgtt
cccgcgcatcacaccggcccttctcctccccaacccactccgtattcgtcttcctatggg
catcattttggtgggatgggccgcggcggtgtctctgtgcctgaatctgtatccaattcc
agtccttcccaggtgagaccgtcaatgcagggaatggggatgatgggttcactcggttct
agttctcaaatgcggccaactgggattccggcacatcatccacagaggccagttcaatcc
tctgtgaggccgccatctactgcaagtaatcagtccccgtcttctcaaaatttccaaggg
cacagccttttacgagtttcatcagtgggatctggttcatcaccaaatacatctccaggt
ttgcagcctcatactcagccatggttgtcatctgggtcacaagggaagccgcctatgcca
tccccttcatataggcagcagatgaactcgccatccatgcagcaaaggtcgcatcttccg
cagcaacagccccatcctacagctccccagcagcagcaccattccatgccttcagcttca
cagcagcagcaccatcccctgccttctgcttcaccgcaacagcaccatcccatgccttca
gcttcacagcaacagcatacatcatccgcgcaacaccaacaaccttcctcatcacatcag
ggtcccgagcattttggccaacaagttcagccatcaagggtcccacaaaccatgcctcgt
cagcaacaaatcacaagggttcagggccctgtaaatcccaagtcttccactcttgtagct
gcacagcctaacacggtccaatcaggggcccaaaataaaacacctagtccagaaacagat
gaatcttgtaatagaattcttggcaaaagaagcatccgtgagctagtcaaccagattgat
ccatctgagaagttggatccagaagttgaagaaattctcatggacattgcagatgaattt
gttgattctattacaacatttagttgctcactagccaagcatagaaaatcaactcaatta
gaagcaaaagacatacttctacatattgaaaaaaattggaatataactcttcctgggttc
ggtggtgatgagattaaaggcttcagaaaaccacttacaaatgatatgcacaaggagcgc
cttgctgtgataaagaagtccatagtagcaactgagacagcaaatgctaggaatcccacc
ggacaagccactggaaatgcaaagggtggtcttgttaagacacctgccaacatcataagc
tcccaaaactctaatatgcgtgaagttacataa
DBGET
integrated database retrieval system
