Malus sylvestris (European crab apple): 126593797
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Entry
126593797 CDS
T09027
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03430
Mismatch repair
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126593797
03460 Fanconi anemia pathway
126593797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126593797
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
126593797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
fvmX5
Motif
Other DBs
NCBI-GeneID:
126593797
NCBI-ProteinID:
XP_050115863
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Position
12:complement(3513701..3521273)
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AA seq
731 aa
AA seq
DB search
MEIEAEEEEQVATEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDARSSSINVV
VKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYV
AHVTVTTITKGQLHGYRVSYKDGVMEHEPKACAAVKGTQITIENLFYNMTARRKTLQNSA
DDYSKIVDLLSRFAIHHMNVSFSCRKHGAARADVNSVSTASRIDAIRSVYGVSVARSLMK
IEASDKDPSSSVFQMDGFISDSNYVAKKITMVLYINDRLVDCTALKRALEVVYAATLPKA
SKPFIYMSIMLPPEHVDVNVHPTKREVSLLNQEIIIEKIQSVVEWRLRSSNETQTFQEQA
VEPSSSSQMVSRKDSNQNPSPSAASKLHKVPVNKMVRTDSSNPAGRLHVYLQPDPRGHLE
RNASLTAVRSSVRLRRNPKETADLTSLQELIDEIDSNCHSGLLDIVRHCTYIGMADDVFA
LLQHDTHLYLANVVNLSKELMYQQVLRRFAHFNAIQISEPAPLKELIVLALKEEEDPECS
VNHELNEKIAEMNTELLKQKAAMLGEYFSIHIDNDGNLSRLPVILDQYTPDMDRVPELVL
CLGNDVDWEEEKKCLQVISAALGNFYAMHPPMLPNPSGDGLQFYQKRKPFRNPEESTSCN
TGDDDVMTENEIEHELVAEAENAWAQREWSIQHVLFPSMRLFFKPPNSMATNGTFVRVAS
LEKLYRIFERC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaggcagaagaagaagagcaagtcgcgacggagccacccaaaattcaccgc
ctagaagagtctgtggtgaaccgaatcgctgccggcgaggtcatccaacgccctgtctcc
gccgtcaaagagctcgttgagaacagcctcgatgcccgctcctcctccatcaacgtcgtc
gtcaaggacggcggcctcaaactcatccaagtctccgacgacggccacggcatccgctat
gaggacctgccgatcctgtgtgagcggcacacgacgtcgaaactctcggcgtttgaggac
ttgcagtcgataaagtcgatggggttcagaggagaagcacttgccagcatgacgtacgta
gctcacgtcaccgtcaccaccattaccaagggccagttgcatggttatagggtatcttat
aaagatggtgtaatggagcacgaaccgaaggcgtgcgctgctgtaaaaggaactcaaata
acgattgagaacttgttctataacatgactgcccggagaaagacactacaaaattctgct
gatgattattcaaagattgtagatttgctaagccggtttgcaattcatcatatgaatgtt
agcttctcctgcagaaagcatggagctgctagagcagatgttaattctgtttccacggca
tcaaggattgatgcaattcgatcggtgtatggggtgtctgttgctcgcagtctgatgaaa
atagaagcttcagataaagatccttctagctccgtttttcagatggatggctttatctcc
gattcaaactatgttgccaagaagataaccatggtgctttatataaatgatagattggtt
gattgcaccgctctgaagagagctctagaagttgtttatgctgccacattgccaaaagca
tcaaaacccttcatatacatgtcaattatgttaccacctgaacatgttgatgtgaatgtt
cacccgacaaagagagaggtaagccttctgaatcaggaaatcatcattgagaagatacag
tcagtggttgaatggaggttgagaagctccaatgagacacaaacatttcaggaacaggca
gtcgaaccttcttcatccagccaaatggtttcaagaaaggattcaaatcagaacccctca
ccatctgcagcatcaaaattacacaaggttccagtgaataaaatggttagaacggattca
tcaaatcctgctggtaggttgcatgtgtatttgcaaccagatcctcgtggccatcttgaa
aggaatgctagcttgacagctgttagatcttctgttagactaagacgaaacccaaaggaa
accgctgatctgaccagccttcaggagcttattgatgaaattgacagcaattgtcattct
ggtctactggacattgtgagacactgcacatacattggaatggcagatgatgtttttgca
ctgcttcagcatgatacccatctttatcttgcaaatgtagtgaacttgagcaaagagctc
atgtatcagcaagtcctgcgtcggtttgcccattttaatgctatacaaataagtgagcca
gccccactgaaggagttgattgtgttggcactaaaagaggaggaggatccagaatgcagt
gtgaatcatgaacttaacgagaagattgcagagatgaatacagaactactcaagcaaaag
gctgctatgttgggggagtatttttccattcatatagataatgatggaaatttgtctagg
cttccagtcatacttgatcaatacacacctgacatggatcgtgtccctgaacttgtgctt
tgtttgggcaacgatgttgattgggaggaggaaaaaaaatgccttcaagtaatttcagct
gcacttggaaacttctatgccatgcatcctcctatgttgcccaacccatctggtgatggc
ttgcaattttaccaaaagagaaagccttttaggaatcctgaagaaagtacctcatgcaat
actggagatgacgacgtcatgacagaaaatgaaattgagcacgaactagttgcagaggca
gaaaatgcatgggctcagcgcgaatggtcaatccagcatgttttgtttccatcaatgagg
ctctttttcaagccaccaaattctatggctacaaacggaacatttgtacgggtagcttca
ctggagaaactataccggattttcgaaagatgctga
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