Malus sylvestris (European crab apple): 126594002
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Entry
126594002 CDS
T09027
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03010
Ribosome
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
126594002
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126594002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msyl03011
]
126594002
04121 Ubiquitin system [BR:
msyl04121
]
126594002
Ribosome [BR:
msyl03011
]
Ribosomal proteins
Eukaryotes
Large subunit
126594002
Archaea
126594002
Ubiquitin system [BR:
msyl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
126594002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Plexin_RBD
Dsc3_N
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
126594002
NCBI-ProteinID:
XP_050116160
LinkDB
All DBs
Position
12:complement(3022827..3024640)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctaaccgggaagaccatcactctcgaggtcgagagcagt
gacactatagacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag
cagcgcctgatcttcgccggcaagcagctcgaagacggccgaactctagctgactacaac
atccagaaagagtcgactcttcatctggtgctgaggctccggggagggattatcgagcct
tctctgatggctttggctcgcaagtacaatcaggagaagatgatttgcagaaagtgctat
gctcgtctgcatccaagggcagtgaactgcaggaagaagaagtgtggccacagcaaccag
ttgaggcccaagaagaagatcaagtag
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integrated database retrieval system
