Malus sylvestris (European crab apple): 126594101
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Entry
126594101 CDS
T09027
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126594101
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126594101
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
126594101
Protein phosphatases and associated proteins [BR:
msyl01009
]
HAD phosphatases
Fcp/Scp phosphatases
126594101
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
126594101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
126594101
NCBI-ProteinID:
XP_050116266
LinkDB
All DBs
Position
12:27273243..27277237
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AA seq
706 aa
AA seq
DB search
MMGKSQPPPPQQQPMSVKDTVYKLQLALLEGVKTLDQLYLAGSIISRSDYSDVVTERTIG
DHCGYPLCPSALPPESSRPRKGHYRISLKEHKVYDLHETYMYCSSSCLIGSKAFAQSLSE
ERCDVLDYGKVEKVLRAFGDVGLDKEEVGLGETRDLGISKLKIEEKSEAEIGDLGISKLK
IEEKSEVQLGDVGVVGPSNAIEGYVPHNQRISKPLGSKKNKKGSKGKEAKTSGGKDMSFN
EMDFMSCIIASDEYSVSKIPPSSGENGCETKFNESEEKVARIKNDSEKKSKQSRGGKSKI
SEEDIVGIREAPSTSETSQTFLIRSTKEAREEFPGDKEKSNEPKLRSSLKPSGAKKLSRS
VTWADEKVEHRMNGYDTLGGIHKPLLKPSAENEVGCSVTWSDEKIDSTKSKNVCEVREVQ
GAKEGSGVLGNLELLDNERLESAEFCAMALRQAAEAVASGDSDVNGAVSSAGIILLPRPD
GVDEDEPTEDVDMLEPEQAPLQQRNPGIPNFDLFDSEDTWFDDPPEGFNLTLSPFLTMWN
SLFTWITSSTLAYIYGRDESFHEEFLSINGKEYSRKIVLVGGHSSEIKKTLAESLARTLP
GVVSQLRLATPISSLEQEMSCMLETMTFVDALPAFRMKQWKVVVLLLLEGLSVCRIPALG
PHMPDRRTLFHKVLDGSQITAEHYELMKDHILPLGRAPEFSAQSGA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaagagccaaccgccgccgccgcagcagcagcccatgtcagtgaaagacaca
gtgtacaagctccaactcgctctcctcgaaggcgtcaaaacccttgaccaactctacttg
gccggctcaatcatctcccgctccgattacagcgacgtcgtcacggagcgcaccataggc
gaccactgtggctaccctctttgccccagtgccttgcctccggaatcctcccgcccccgc
aagggccactatcgcatttcactcaaggagcacaaggtctacgaccttcatgagacctac
atgtactgctcctcgagctgtctcatcggaagcaaggcttttgctcagagtttgagcgag
gagaggtgcgatgtcctggattatggcaaggttgagaaggtcttgagggcttttggggat
gtgggtttggacaaagaggaagtgggattgggggagactcgggatttgggaatttcgaag
ttgaagatcgaagaaaagagcgaagcggagattggggatttggggatttcgaagttgaag
attgaagaaaagagtgaagtgcagttaggggatgtgggcgtggttggtccctctaatgct
attgagggctatgttccacacaatcagcggatatccaagccattgggttcgaaaaagaac
aaaaaagggtccaaaggtaaagaagcgaaaacgagtggcgggaaagatatgagctttaat
gagatggatttcatgagttgtataatcgctagtgatgaatacagtgtgtccaaaatccca
ccaagttctggggagaatggttgtgaaactaagtttaacgaatcagaagaaaaagtcgct
cgtattaagaatgattctgaaaagaaatccaaacaatcaagagggggaaaaagtaagatt
tccgaggaagatattgttggcattcgagaggcgccttcaacttcagagacttctcaaact
tttttgattagaagtactaaagaagcaagagaggaattccctggtgataaggagaaatca
aatgagccaaagctaagatcctctcttaaaccttcaggggcaaaaaaacttagtcgctct
gtcacttgggctgacgagaaggtggaacatagaatgaatggttatgatacattgggcggt
atccacaaacctttgcttaaaccttcagcagaaaatgaagtcggttgctctgttacctgg
tctgatgagaagattgatagcactaagagtaaaaatgtttgcgaggttagagaagtgcaa
ggtgcaaaagagggttctggtgtattagggaatttggaattgctagataatgaacgtttg
gaatccgccgaattctgtgccatggcattgaggcaggcagcagaagctgttgcatctgga
gattctgatgttaatggtgctgtttcgagtgctggaattattttattgccacgtccagat
ggtgtggatgaagatgagcctactgaggatgttgacatgcttgaaccagaacaagctcct
ctgcagcaaagaaaccctggaattccaaattttgatttgtttgactctgaggatacttgg
tttgatgatccgccagagggtttcaacttaactttatcaccttttttaacaatgtggaat
tcactctttacatggataacatcatctacactagcatatatatatgggagggatgaaagc
tttcatgaagaatttctctctattaatgggaaagagtattcccgtaagattgtcttggtt
ggtggccactcttctgaaatcaagaaaactctggctgaatctcttgctcggactctacca
ggagttgtttcccaacttaggcttgcaacaccaatatctagtttggagcaagaaatgagc
tgcatgttggagacgatgacttttgttgatgcactaccagctttcagaatgaaacaatgg
aaagtggttgttcttcttctccttgagggtctctctgtttgcaggattcctgcactcggt
cctcacatgccggataggaggacactgtttcacaaggtgctggatggttcccagataact
gcagaacactacgagcttatgaaggatcatatattacccctaggccgagcacccgaattc
tcagctcagagtggtgcttaa
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