Malus sylvestris (European crab apple): 126594110
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Entry
126594110 CDS
T09027
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126594110
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
126594110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
EarP
Motif
Other DBs
NCBI-GeneID:
126594110
NCBI-ProteinID:
XP_050116279
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All DBs
Position
12:complement(27407170..27411183)
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AA seq
643 aa
AA seq
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MSDLELESDLLEAAGRTSLAGKKRDRLPSSRKQRGCSYSDDGSDSRGEDSDDDHGSRKPS
QVPLKKRFEPTERGSDEERDSSYDGSDHEGENSDESDFGPDLYKNDADRKRLAAMSELER
EMILTNRAEKKGGKDLMEKLRSRRGNEKSTQSRKEDPLPFSCGVRSSARAADKSAAMDDA
LNKLRAKRMKQQDSKDRHKLRDASKGGAGSQDISPTKHRSIQIETVDGLPTEEEALNADD
EFLDSDEESSELPTFQDIKDITIPRSKLAKWVMEPFFEELIVGCFVRVGFGISSEGPVYR
LCMVQNVVATNPGREYKLEGKVTHKYLNCVWGSESSASKWPMANVSDSPPQEKEFEQWLK
EVKRAGQMPSKQEVVEKKETLQKSNTFVYSAATVKQMLQEKKASARPVNVAVEKERLRRQ
LDVAESKGNEEEVERIKTRLQELEASRQTQGKDSKAIRLAEMNRKNRFENFINASGLKPR
NMNLKAGEAGYDPFSRRWTRSRNYYDARPGGGDEAAEATDGTTGTGSNGEKANVTGELGM
QATEAALEAAAGAGKLVDTSAPVDKGTESYMLHNFELPISLAPLQKYGGPQGAAIAYMER
RQRIEATVGRRVLDDGRRHASTLTIKDYMRRQEMHHAHPDPDS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttggaattggaaagtgacctccttgaggccgcaggaagaactagtttggct
gggaaaaagcgggaccggcttccatcttctagaaagcaacgtggatgttcatattctgat
gatggaagtgactccagaggtgaagactcagatgatgatcatggaagcaggaagccctct
caagtacctctgaagaagaggtttgaacctacagaaaggggcagtgacgaagaacgtgat
tctagctatgatggttctgatcatgagggtgaaaatagtgatgaatctgattttggccct
gatctatacaagaatgatgccgacaggaaacggcttgcagcaatgagtgaacttgaaaga
gagatgattttgacaaatcgagcagagaagaaaggcggtaaggacttaatggagaaattg
agatcaaggagaggcaatgaaaaatctacccaatcaaggaaagaggaccctcttccattt
tcttgcggtgtacgctcatcagctcgggctgctgacaagtcagcggccatggatgatgca
ttgaataaattgcgagcaaaacgtatgaagcaacaagactcaaaggatcgccataagtta
agggacgcgtcaaaaggaggtgcgggtagccaggatatttcaccaaccaagcatcgctcc
attcaaattgagactgtggacgggttacctactgaagaggaagcattgaatgcggatgat
gaattccttgacagcgatgaggaaagttcagagctaccgacatttcaggacataaaggat
attaccataccaaggtcaaaacttgcaaaatgggttatggaaccattttttgaggagtta
atcgtgggctgctttgttagggttggatttggcatatcatcagaaggtcctgtctacagg
ctttgcatggttcagaacgtggttgccacaaatcctggccgggagtacaagctagagggt
aaagtcacacataaatacttgaattgtgtttggggcagtgaaagttctgcttccaaatgg
ccaatggctaatgtctcagattctcctccgcaagagaaggagtttgaacagtggcttaag
gaagtcaagcgtgctggccaaatgccaagcaaacaggaggtggtagaaaagaaggagacc
cttcagaaatcgaatacatttgtttactcggcagccactgtgaagcaaatgttgcaggag
aaaaaggcctcagcaaggccagttaatgttgcagttgagaaggagcgattgaggaggcag
ttggatgttgcagaaagtaaaggcaacgaggaggaagttgagaggatcaagacaaggctc
caggaattagaagcatccaggcaaactcaggggaaagatagcaaggctattaggttagct
gaaatgaacaggaagaacaggttcgagaattttataaatgcttcggggttgaaaccaaga
aatatgaatctgaaagcgggggaggctggttatgatccattctcgagaagatggactcgc
tcaagaaattattatgatgcaaggcctggaggaggcgatgaagctgctgaggcaacagat
ggaactaccggtacaggcagcaacggggaaaaggcaaatgtaacaggagagcttggaatg
caagcaacagaggcagcattggaagcagcagccggtgcagggaagttggttgatacaagt
gctcctgtggacaaagggacagaatcatatatgctgcacaacttcgagctgccaatctcg
ttggctccacttcagaagtacggtggacctcagggtgctgcgatcgcgtatatggagaga
agacaaaggatcgaagcaacagtcgggcgtcgagtgctggatgacgggaggaggcatgct
tcgaccttgaccattaaggactatatgagacgacaggagatgcaccacgctcaccctgac
cctgattcgtaa
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