KEGG   Malus sylvestris (European crab apple): 126594110
Entry
126594110         CDS       T09027                                 
Name
(RefSeq) protein RTF1 homolog
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126594110
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     126594110
SSDB
Motif
Pfam: Plus-3 EarP
Other DBs
NCBI-GeneID: 126594110
NCBI-ProteinID: XP_050116279
LinkDB
Position
12:complement(27407170..27411183)
AA seq 643 aa
MSDLELESDLLEAAGRTSLAGKKRDRLPSSRKQRGCSYSDDGSDSRGEDSDDDHGSRKPS
QVPLKKRFEPTERGSDEERDSSYDGSDHEGENSDESDFGPDLYKNDADRKRLAAMSELER
EMILTNRAEKKGGKDLMEKLRSRRGNEKSTQSRKEDPLPFSCGVRSSARAADKSAAMDDA
LNKLRAKRMKQQDSKDRHKLRDASKGGAGSQDISPTKHRSIQIETVDGLPTEEEALNADD
EFLDSDEESSELPTFQDIKDITIPRSKLAKWVMEPFFEELIVGCFVRVGFGISSEGPVYR
LCMVQNVVATNPGREYKLEGKVTHKYLNCVWGSESSASKWPMANVSDSPPQEKEFEQWLK
EVKRAGQMPSKQEVVEKKETLQKSNTFVYSAATVKQMLQEKKASARPVNVAVEKERLRRQ
LDVAESKGNEEEVERIKTRLQELEASRQTQGKDSKAIRLAEMNRKNRFENFINASGLKPR
NMNLKAGEAGYDPFSRRWTRSRNYYDARPGGGDEAAEATDGTTGTGSNGEKANVTGELGM
QATEAALEAAAGAGKLVDTSAPVDKGTESYMLHNFELPISLAPLQKYGGPQGAAIAYMER
RQRIEATVGRRVLDDGRRHASTLTIKDYMRRQEMHHAHPDPDS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtcagacttggaattggaaagtgacctccttgaggccgcaggaagaactagtttggct
gggaaaaagcgggaccggcttccatcttctagaaagcaacgtggatgttcatattctgat
gatggaagtgactccagaggtgaagactcagatgatgatcatggaagcaggaagccctct
caagtacctctgaagaagaggtttgaacctacagaaaggggcagtgacgaagaacgtgat
tctagctatgatggttctgatcatgagggtgaaaatagtgatgaatctgattttggccct
gatctatacaagaatgatgccgacaggaaacggcttgcagcaatgagtgaacttgaaaga
gagatgattttgacaaatcgagcagagaagaaaggcggtaaggacttaatggagaaattg
agatcaaggagaggcaatgaaaaatctacccaatcaaggaaagaggaccctcttccattt
tcttgcggtgtacgctcatcagctcgggctgctgacaagtcagcggccatggatgatgca
ttgaataaattgcgagcaaaacgtatgaagcaacaagactcaaaggatcgccataagtta
agggacgcgtcaaaaggaggtgcgggtagccaggatatttcaccaaccaagcatcgctcc
attcaaattgagactgtggacgggttacctactgaagaggaagcattgaatgcggatgat
gaattccttgacagcgatgaggaaagttcagagctaccgacatttcaggacataaaggat
attaccataccaaggtcaaaacttgcaaaatgggttatggaaccattttttgaggagtta
atcgtgggctgctttgttagggttggatttggcatatcatcagaaggtcctgtctacagg
ctttgcatggttcagaacgtggttgccacaaatcctggccgggagtacaagctagagggt
aaagtcacacataaatacttgaattgtgtttggggcagtgaaagttctgcttccaaatgg
ccaatggctaatgtctcagattctcctccgcaagagaaggagtttgaacagtggcttaag
gaagtcaagcgtgctggccaaatgccaagcaaacaggaggtggtagaaaagaaggagacc
cttcagaaatcgaatacatttgtttactcggcagccactgtgaagcaaatgttgcaggag
aaaaaggcctcagcaaggccagttaatgttgcagttgagaaggagcgattgaggaggcag
ttggatgttgcagaaagtaaaggcaacgaggaggaagttgagaggatcaagacaaggctc
caggaattagaagcatccaggcaaactcaggggaaagatagcaaggctattaggttagct
gaaatgaacaggaagaacaggttcgagaattttataaatgcttcggggttgaaaccaaga
aatatgaatctgaaagcgggggaggctggttatgatccattctcgagaagatggactcgc
tcaagaaattattatgatgcaaggcctggaggaggcgatgaagctgctgaggcaacagat
ggaactaccggtacaggcagcaacggggaaaaggcaaatgtaacaggagagcttggaatg
caagcaacagaggcagcattggaagcagcagccggtgcagggaagttggttgatacaagt
gctcctgtggacaaagggacagaatcatatatgctgcacaacttcgagctgccaatctcg
ttggctccacttcagaagtacggtggacctcagggtgctgcgatcgcgtatatggagaga
agacaaaggatcgaagcaacagtcgggcgtcgagtgctggatgacgggaggaggcatgct
tcgaccttgaccattaaggactatatgagacgacaggagatgcaccacgctcaccctgac
cctgattcgtaa

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