Malus sylvestris (European crab apple): 126594140
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Entry
126594140 CDS
T09027
Name
(RefSeq) acyl-CoA-binding domain-containing protein 4-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126594140
Membrane trafficking [BR:
msyl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126594140
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
126594140
NCBI-ProteinID:
XP_050116305
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Position
12:27566832..27571089
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AA seq
652 aa
AA seq
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MGSLGGEAARKKAMWLYPKIMGFNPSERWGHSACYSRGVLYIFGGCCGGMHFSDVLVLDL
EKMLWNTLVSTGQGPGPRDSHSAIVLGHKMIVFGGTNGSKKVNDLHILNLVTKEWTRPEC
TGTPPSPRESHTATLVGDEKLVIFGGSGEGKGNYLNDLHVLDLNTMRWTSPEVTGDIPVP
RDSHSTIVMGKKLLVYGGDRGDRYYGGVDMLDMNTLTWSRLAVQGSSPGARAGHATVSIG
TKVYVIGGVGDKHYYNDVWVLDVITCSWTQLEICGQHPQGRFSHTAVVTDSDIAVYGGCG
EDERPLNELLVLHLGAEHLNGRYNVSMCKIFGSHWNRERGRISKGADFNTQKTMLMGNHV
VVRETTHGPESEARRSLQFKSDTLHPKRRRTTSTKSIDLESEQEEHSLSLSQHSSPSHSD
QEQIPNPNIVDSNQGSQGFHLFKKLNHSPSNGQSPIVTSSHKANRNSGQRSPDLNLLGEC
HTEPKREQYHHVNIGRPSMQFQAVEQKHLEAGPIQNMMGAEVQGKVDGAFDSGFLMTAMV
NGKIYRGVLFAPGPQIISRRPTFVQNPSSSTSQIPISEAKPFPNSNHHEPPLKLSEQPMR
NSMPESGLGLRQPQVARPFSVIRANPSVAKERSDLPGVFLTLGGPGSPTGGS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgggaggtgaagctgcaaggaagaaggcaatgtggctctatccaaagatc
atgggatttaatccttctgaaagatgggggcactctgcctgctattctcgtggggttttg
tatatttttgggggatgttgcggcggtatgcatttcagcgatgttcttgtgcttgatctt
gagaaaatgttatggaacactcttgtgtcaaccggtcaagggcctggtcctagagacagc
catagtgccattgttctagggcacaagatgatagttttcgggggaactaatggctccaag
aaggtaaatgatcttcacatattgaatcttgtgaccaaagaatggacacggccagaatgt
acgggtactccaccttcaccccgagaaagtcatactgctacccttgttggtgatgaaaaa
ttagtgatattcgggggtagtggagaaggtaaaggaaattacttgaatgatcttcatgtt
ctagaccttaataccatgagatggacttctcctgaggtgacgggtgatattcctgttcct
cgagacagtcatagcacaattgtgatggggaagaagcttcttgtgtatggtggggaccgt
ggtgataggtattatggtggtgtagatatgcttgacatgaacacactgacatggtcgagg
ttggctgttcaaggatcttcaccgggtgccagggcaggtcatgcaactgttagtatcggg
acaaaggtttatgtcattggaggggttggagacaaacattattacaacgatgtttgggtc
ctagatgtgattacttgttcatggactcaacttgaaatatgtggccaacatccacaagga
cgattctctcatactgctgttgttacagattctgatattgccgtctacggagggtgtggt
gaggacgagcgccctctgaatgagttgttggtgttgcatcttggagcagaacatctcaat
ggtcgttacaatgtttccatgtgcaaaattttcggaagccactggaaccgagagaggggg
aggatctcaaagggagcagattttaacacgcagaaaactatgctaatggggaatcatgta
gtagtacgagagacaacccacggaccagaatcagaagcaagacggtctcttcagttcaaa
tcagatactttacatccaaagaggagaagaaccacaagtacaaaatcaatagatctcgaa
tcagaacaagaggagcattctctatcactctcccagcattcatcaccatcacactcggat
caagagcagatcccgaatcctaatattgttgattccaaccaaggttctcaaggttttcat
ttgtttaagaaactcaatcatagtccgagcaatggccaatctcccattgtcacgagcagc
cataaagctaatagaaattctggacaaagatctccagaccttaacttgttaggagagtgt
cacaccgaaccaaaacgagaacagtatcatcatgtcaacattggtagaccaagtatgcaa
tttcaagcagtagaacaaaaacacttggaggcagggcctattcagaacatgatgggtgct
gaggttcaaggcaaagttgatggagcattcgactcaggtttcctaatgaccgcgatggtt
aatggaaagatatatagaggagtcttatttgcaccaggaccccagatcatctcaagaagg
ccaactttcgtgcaaaatccttcgtcttcaacaagccaaattcccatttctgaagcaaaa
ccatttccaaactcgaatcatcacgagccacccttgaagctatctgagcaaccaatgagg
aattccatgccggagtctggcctgggcctcaggcaacctcaggttgctcgaccattttcg
gtcattcgagccaatccatctgtagccaaagaaagaagtgatcttcctggtgtgttttta
acacttgggggaccaggaagtccaactggtggatcttag
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