KEGG   Malus sylvestris (European crab apple): 126594196
Entry
126594196         CDS       T09027                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126594196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126594196
Spliceosome [BR:msyl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    126594196
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    126594196
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 126594196
NCBI-ProteinID: XP_050116372
LinkDB
Position
12:complement(27883399..27886571)
AA seq 374 aa
MANRTDPSAKNIRGTNPQNLVEKIVRTKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGTDTDAYQYL
EPLYNDYRKLRRKLPDGNFTLTHVDEVIDELLTKDYSCDIAMPRIKKRWTLEATGSLELR
KSALEEDFEEEEEKEENDQVDVMDEDVHDRDYYRGRSPARERDRDRRRDSHRYRDRDYDR
DYERDRDYDRDRGRERERDRDRDRDRDHYRLRDEKDYGRDRDRDRDRDWDRRGRDRGRRR
SHSRSRSRSRDRDGVDRDRRRHARSISPRRPDREEPKKKKEKKKEKKDDGTDHPDPEIAE
ANRLRASLGLKPLK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggacccgtcggcgaagaacataaggggaacgaacccccagaatctg
gtggaaaagatcgtacggacgaagatataccagaacacgtactggaaggagcagtgcttc
gggttgactgccgaaaccctagtcgacaaagccatggagctcgaccacatcggcggcacc
ttcgggggaaaccgcaagcccacgcctttcatgtgcctcgtgatgaagatgcttcagatc
cagccggagaaggagatcgtcatcgagttcatcaaaaacgacgattacaagtacgttcgg
atacttggtgcattttatttgcggcttacgggaactgatactgatgcataccagtaccta
gagcctttgtacaatgactatcggaagttgaggaggaaactgcctgatgggaattttacc
ttgacgcatgtggatgaggttattgatgaacttctcacaaaagattactcatgtgacatt
gcaatgccacgaattaaaaaaagatggactctcgaagcaactggttcattggaactcagg
aaaagtgctttggaggaggactttgaggaggaggaagagaaagaggagaatgatcaagtt
gatgtaatggatgaagatgtccatgatagggattattatcgtggtcgaagccctgccagg
gaaagagatagggatagaagacgcgacagtcacagatacagggaccgagattatgacaga
gattatgaaagggatagagattatgacagggatcgtggacgtgaaagagagagggacaga
gacagggatagggatcgagaccattatcggctaagagacgaaaaggattatggtcgtgat
agggatagggacagggatagggattgggacaggcgagggagggatcgtggcaggaggagg
agccattcaaggagcagaagtcgtagtagagatcgtgatggtgtggatagagatcgcagg
agacatgcccgcagcattagtcccaggagacctgatcgtgaggaaccgaagaagaagaaa
gaaaagaagaaggagaagaaggatgatggcacagaccatccggatccagagattgccgaa
gcaaacagactccgagcatctcttgggttgaaacccctgaagtag

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