Malus sylvestris (European crab apple): 126594211
Help
Entry
126594211 CDS
T09027
Name
(RefSeq) (-)-germacrene D synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
126594211
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
126594211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
PhoU_div
Motif
Other DBs
NCBI-GeneID:
126594211
NCBI-ProteinID:
XP_050116384
LinkDB
All DBs
Position
12:complement(23596030..23607853)
Genome browser
AA seq
555 aa
AA seq
DB search
MSSVEVPLSQSSNPNDTFDVHRPNPSATFSPSIWGDHFLSYASLEVDAELEQHVQELKEE
VRRMLTTSLQNVSQKLNLIDDIQRLGVSYHFENEIEEILQKIHKTSYDLDDLYTAALRFR
LLRQQGYNVSCDLFNKFKDGDGKFKESLVDDVVGLLSLYEATHLRIHGEEILDEALTFTT
TNLQSATFRLSPPLAKAVTHALNQQLRKGLPRVEARYHLSVYQELRESPNETFLTFAKLD
FNRLQRVHQKELSEITRWWKDLDVPNKLPFARDRLVEVYFCWSMSVYFQPQYSFARRTSC
KVTAMTSIIDDLYEYGTYEQLELFTEAIERWDVSAMDQLPEYMKVCYRALLDVYSEIHEK
LLHDGKLYRIHHAREAMKKQVRGYFDEAKLFHQKHIPSLDEYMSLSLVTSGYPLLITTSF
VGMEEATIDSFDWLLTFPQAVKAASKIVRLMDDIVDHKFEQEREHFISAVNCYMKKYGAT
EEEAIIELKRQVNSAWKDINEACLHPTAVPMPLLIRILNFARLMDVVYKCEDGYTNAKGV
LKDLIVSTLVEPVAL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtggaagttccactatctcaatcttcaaacccaaatgacacttttgatgtt
catcggcctaacccttcagccactttttctcccagcatttggggtgaccattttctgtcc
tatgcttctttggaagtggatgctgaacttgaacaacatgtacaagaactgaaggaagaa
gtgagaaggatgctaacgacatcacttcaaaatgtttcccaaaagctgaacttgattgat
gacattcagcgcttaggtgtgtcctaccattttgaaaatgaaattgaagaaattttacag
aaaattcacaagacctcttatgatttggatgacctgtacacggctgctcttcgttttcga
ttgctaagacaacaaggttataatgtttcatgcgacttattcaacaagttcaaggacggt
gatggaaaattcaaggaatcactcgttgatgatgttgtaggactactaagtttgtatgaa
gccacacaccttaggatacatggagaggagatactagatgaggctctaaccttcaccacg
actaatctccagtcggcgacattccgtttaagccccccacttgcaaaagcagtaacccat
gccctaaatcagcagctccgaaagggtttaccaagggttgaagcaaggtatcacttgtca
gtctaccaggaactaagagaatcaccgaatgaaactttcctaacgttcgccaagttggat
ttcaaccgactgcaacgagtccatcagaaagaacttagcgaaatcacacggtggtggaag
gacttggacgtgccaaacaagctacctttcgcaagagacagattggttgaggtctacttc
tgctggagtatgtcagtctactttcagccgcagtattcctttgctaggaggacatcatgc
aaagttactgctatgacatccattatcgatgacctttatgaatatggcacatatgaacaa
ctagagctctttactgaagctattgagaggtgggatgtctcagccatggatcaactacca
gagtatatgaaagtctgctatagggcgttgttagatgtatacagtgaaattcatgaaaag
cttttgcacgatgggaaactatatcgcatccaccatgcaagagaagcgatgaaaaaacaa
gttaggggctacttcgatgaagccaaattgttccaccagaagcacataccatcactggat
gaatacatgtctctatcacttgtcaccagtggctacccgttgctaataaccacatccttt
gttggaatggaagaagctacaatagactccttcgattggttgttaactttccctcaggcg
gtgaaggctgcatcaaaaattgtcagactcatggatgacatagtggaccacaagtttgag
caagagagagaacattttatctcagctgtgaactgttacatgaagaaatatggtgccaca
gaagaagaagcgataatcgaacttaaaagacaagtgaatagtgcatggaaggacataaac
gaagcatgcctccaccctaccgctgtccccatgcccctgctaattcgtattcttaatttt
gctcggctcatggatgttgtgtacaagtgtgaagatggctacactaatgctaagggcgtg
ctaaaagatcttatagtttctacactagtggaacccgtggctttatga
DBGET
integrated database retrieval system
