Malus sylvestris (European crab apple): 126594229
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Entry
126594229 CDS
T09027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126594229
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126594229
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Helicases
126594229
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
AAA_19
UTP25_NTPase-like
Utp25_C
PhoH
Motif
Other DBs
NCBI-GeneID:
126594229
NCBI-ProteinID:
XP_050116395
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Position
12:18782688..18786798
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AA seq
539 aa
AA seq
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MEEGTSFLFAGVNFNRKKFSRDFSRFQKKNIESEKVVEDSSLFGITESATEQVAAEEEEV
RAVPVKKRKRKGEVSEGVEGISVFKTSKMAKAAKAEKQKPGNELSEHKKELNRQLERDSL
LRKKYNIHVSGNNIPSPLDSFADLTSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSS
RECFACAPTGSGKTLAFVCPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNK
FYIKLMTKDLARNADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELG
LLKQIDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASETIKQKL
VFAGSEEGKLLALRQSFKESLNPPVLIFVQSKERAKELYGELLFENIRVGAIHSDMSQAQ
RENAVDDFRAGKTWVLLATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSG
EAITFYTEEDIPYLKNIANVMSTSGCEVPSWIMALRKQKWKKHRPRRESISTQPKDEKE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcacttcatttttgttcgccggcgtcaacttcaaccggaaaaagttctcc
agggacttctccagattccagaagaagaacatagagagcgagaaagtggtagaagattct
agcttgttcggaattacggaatctgcaacggagcaagtggcggcggaggaggaggaggtg
cgagcggtgccagttaagaagaggaagcggaagggggaggtttctgagggtgtggagggg
attagtgtctttaagacctcaaaaatggcgaaggcagcgaaagcggagaaacagaagcct
ggaaatgaactatccgagcataagaaggagttaaataggcaacttgagcgggattcgctg
ctgcgaaagaagtataacattcatgtgtccggaaataacatcccttcgccacttgatagt
tttgcagacttaacctctagatatgggtgcgagccatatttacttcagaatttggcggaa
cttggatttaaagaaccaacgccaatccaaaggcaggctattccagtcctcttatctagt
cgggaatgctttgcttgtgctccgactggatctggaaaaacccttgcttttgtttgtccc
atgctaatgaaacttaagcatacatctaaggatggcatccgagctgttattctgtgtcct
acacgagaattagctgctcagacaaccagagagtgcaaaaagatggcaaaaggaaataaa
ttctacatcaaattaatgactaaagacctggcaagaaatgcagatttttcaaaaatacgc
tgtgacatactcatttctactccacttcggttacggttggctatccggaaaaagaaggtt
gatttaagcagggttgagtatctggtattggatgagtctgataagctatttgagcttggc
ttgttaaagcagattgactctgtggtcaaagcatgttcaaacccttcaattattcgctcc
ttgtttagtgctactttacctgatttcgttgaggagcttgcccgcactataatgcatgat
gctgttcgagttatcattggcaggaaaaatactgcttctgagactatcaagcaaaaattg
gtctttgctggaagtgaagaggggaagctattagcacttcgtcaaagctttaaggagagt
ctgaatccaccagtgttgatctttgtacaaagcaaggagcgagctaaggaactctatgga
gaactgttgtttgagaacataagagttggtgccatacattctgatatgtcccaagcacag
cgagaaaatgctgtagatgacttcagagctgggaaaacatgggttttacttgccactgat
gttattgctcggggtatggatttcaaaggtgtcaactgtgtaattaattatgattttcca
gattctgcagctgcgtacattcacaggattggtcggtgcggacgagcagggaggagtgga
gaagctattactttctacacagaggaagatattccatatcttaagaatatagctaatgtg
atgtcaacatcaggttgtgaagttccgtcttggatcatggccttgcgcaaacagaagtgg
aaaaagcaccgaccccgaagggaatcgatatcaacacaaccgaaagatgagaaagagtga
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