Malus sylvestris (European crab apple): 126594232
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Entry
126594232 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126594232
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126594232
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126594232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Sec10_N
Motif
Other DBs
NCBI-GeneID:
126594232
NCBI-ProteinID:
XP_050116399
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Position
12:complement(4677974..4683523)
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AA seq
388 aa
AA seq
DB search
MEIPDKMEAEAESHMISAAAFVEGGIQEAYGEACSICLEEFCDGDPSVVTCCKHEFHLHC
ILEWCQRSSQCPMCWQPISLKDPCSQELLEGVERERRIRETARNAPIFHHPTLGDFQFQH
LHVGTTNAELEERIIQHLAAAASMGRAHHHGRREGHRSRLSARGHPHISVPSTHSRSSPL
GPVHAPGGDTEPAEITVASPSTPLTSDGDETSRMSAQYPSVHTDGNSSSPSGSSRTHRNR
QGNSSSNLSSTSHASSLNQDRAGPSELHSLSESLKSKFNSMSMRYKESFSRNTRGLKERL
FSRSTSMSELSSEVRREVNAGIATVSRMMERLETRENSTDNQSSGVNQTADGSAAEQGNQ
NRAEIHGENPLSDNNRPGTTCAAGSASH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagattccagataaaatggaggcagaggctgaaagtcatatgatatcagctgctgca
tttgtggaagggggaatacaagaggcttatggcgaggcctgcagcatatgccttgaggag
ttttgtgatggtgatccttcagtggttacttgttgcaagcatgagtttcacctccactgc
atccttgagtggtgccaacgaagctctcaatgtcccatgtgttggcaacccattagcttg
aaggatccttgcagccaagaattactggagggagtagaaagggagagaagaattagagag
accgcaagaaatgcacccatatttcatcatcccacccttggcgattttcaatttcagcat
ttacatgtgggtactaccaatgctgaacttgaagagcgcataattcagcacttggctgct
gctgcttctatgggaagggcccaccaccatggtagaagggaaggccataggagccgatta
tctgctcgtggtcatccacacatctcagtaccttctactcattctaggtcatctcctctt
ggtcctgttcatgcccctggaggagacactgaaccagctgaaataactgtagcaagtcca
tctaccccacttacatcagatggagacgaaacatcacgaatgagcgcacaatatccttct
gttcatacggatggaaattcttcctcgccatctgggtcttcacgcacgcatagaaatcgt
caaggaaattcctctagcaatttgagctctactagccatgcctcctctttgaatcaggac
agagcaggaccatcagaacttcactctctttcagagtctctgaaatctaagtttaattct
atgtcaatgaggtacaaggaatcgttttcgaggaatacacgaggattgaaggagaggctg
ttctctcgtagcacttctatgtcggaactcagttctgaagtccgtagagaggttaatgct
ggaattgccaccgtatctcgaatgatggagcgccttgagacaagagaaaatagtacagac
aaccagtcttctggagtgaatcagactgcagatggttctgctgcagagcagggcaaccag
aaccgtgcagagattcatggagaaaaccctttgagtgacaacaataggcctggtactaca
tgtgccgcgggttctgcttcacattga
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