Malus sylvestris (European crab apple): 126594308
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Entry
126594308 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126594308
KO
K14791
periodic tryptophan protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126594308
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126594308
Pre-60S particles
Other pre-60S particles
126594308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_WDR75_2nd
Beta-prop_VPS8
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
126594308
NCBI-ProteinID:
XP_050116510
LinkDB
All DBs
Position
12:complement(11616425..11620557)
Genome browser
AA seq
501 aa
AA seq
DB search
MISAISWVPKGVSKPVPSVADLPTKEEIEELIKTGALEKSGDAESEDNDGEMDVETPTQG
DQVSQALEVAKALGRAPKVTEPGTKFDDIADGLRELDMEHYDDEDDGIDVFSSGVGDLYY
PSNDMDPYLKKEKDDDEDSEDSDDVTINPSDAVIVCARNEDEVSQLEIWLYVESEDGEAD
VFVHHDVILSSFPLCTAWLDCPLKGGDKGNFIAVGLMDEPSIEIWDLDIIDEVQPCVILG
GIAEKKKKKGKKVSIKYKEDSHRDSVLGLAWNKEYRNILASASADQQVKIWDVVTGKCNI
TMEHHTDKVQAVAWNHFAPQVLLSGSFDHTVVLKDGRVPSHSGYKWTVTADVESLAWDPH
TEHSFVVSLEDGTIKGFDIRAATSAPTSESKPSFTLHAHDKAVCSISYNPAAPNLLATGS
TDKMVKLWDLSNNQPSCISSRNPKAGAVFSISFAEDNPFLLAIGGSKGKLEVWDTSYDAA
VAQRFGSYYKKSRHQAGPSSG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcaatttcttgggtgcccaaaggggtttcgaagccagtcccctccgtcgcc
gacctgcccaccaaagaggaaatcgaagagctgattaaaaccggcgccttggagaaaagt
ggagatgctgaaagcgaggacaatgacggagaaatggatgttgaaaccccaacacagggt
gatcaagtctcccaagcattagaggtagcaaaagcactcggaagagctcccaaagttacc
gagccagggaccaaatttgatgacatagccgatggattgagggaactcgacatggaacat
tatgacgacgaggatgatggcattgacgtatttagtagtggggttggggacctttactac
ccaagtaacgatatggatccatatctaaagaaggaaaaggatgatgatgaggattctgaa
gacagtgatgacgtgaccattaatccgagtgatgcagtcatagtttgtgcccgcaatgaa
gatgaagtcagccagcttgagatttggctgtatgttgaatcagaagatggtgaagcagat
gtttttgttcaccatgatgtcatcctttcatcatttcccctttgcacagcatggcttgat
tgtcctctcaaaggtggagacaaagggaatttcattgctgttggtttaatggatgaacca
tctattgagatatgggatcttgacatcattgatgaagtacaaccatgcgtgatattgggt
ggtattgctgagaagaagaaaaagaaaggaaagaaggtatcaatcaaatacaaagaagac
agtcacagagattcagttcttggccttgcttggaataaggagtacagaaatatacttgct
agtgcaagtgctgaccaacaagttaagatttgggatgtggttaccggaaaatgtaatatt
accatggagcaccataccgacaaggttcaggcagttgcatggaatcattttgcccctcaa
gttcttctcagtggttcttttgatcatacagtagtcttgaaagatgggagggtgccatca
cattctgggtataagtggactgtcacagctgatgtagaaagcttagcatgggatccacac
actgagcattcatttgtggtgagccttgaagatggcacaatcaaaggttttgatattcgg
gctgccacatctgctcctacttctgagtctaaacctagttttactcttcatgcgcacgac
aaagctgtttgctcaatctcatataaccctgcagcacctaatcttcttgcaactggatcc
acagataaaatggtaaagctttgggatttgtcaaacaaccaaccttcgtgcatttcatcc
aggaatcctaaagcaggagcagtcttttctatttcgtttgcagaagacaacccctttttg
ctggccataggaggctcaaaagggaaactggaagtatgggatacatcatacgatgctgcg
gttgcccaaagatttgggagttactacaagaagagcagacaccaagctggaccttcatct
ggttaa
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