Malus sylvestris (European crab apple): 126594322
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Entry
126594322 CDS
T09027
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126594322
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126594322
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126594322
NCBI-ProteinID:
XP_050116521
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Position
12:8153702..8158049
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AA seq
469 aa
AA seq
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MALQKNELILFFIITLPSFVLCYSSLHENQLIDKYVDEASEFDSKAYPSYFNTIDDGSNL
FKGLIKESADVLCLKSFDKVDSSTSSSAETVSVNDFGAEGDGETDDTKAFEMAWKVACSS
KEAVMVAPKKTYRIKPIRFSGPCKSQLTVQILGTLIASDDRSDFSKDGRHWLIFDSVSNL
VVEGGGAINGNGKNWWQNSCKTDKSKPCKDAPMALTFCKSKNLMVRNLTIQDGQQIHVSF
QKCMNVEVSNLSITAPPKSPNTDGIHVTDTQNILITSCVIATGDDCLSIVNGSKTVQASN
ITCGSGHGISIGSLGSGNSKAYVSDITVNGAKLYGTTNGIRIKTWQGGSGSASNIRFQNI
EMHNVTNPILIDQYYCDRKIPCKEQRSAVEVKNVVYKNIKGTSASDVAIKFDCSKSFPCL
GIMLQDINLQHEGRKTAKALCNNVNVTSIGVVCPLCPKLEGQYETCQCL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcagaaaaatgaactcatcctattctttatcatcaccctcccctcctttgtt
ttatgttatagcagtttacatgagaaccaactcatcgacaagtatgttgacgaagcatct
gaatttgattccaaagcgtatccatcttacttcaacacgatcgacgatggcagtaacttg
ttcaagggcttgataaaggaaagtgcagatgtcctatgcttaaagagcttcgataaagtg
gatagcagcacttcatcttcggctgagacggtcagtgttaatgattttggagctgagggt
gatggagaaactgatgacacaaaggcttttgagatggcttggaaggtagcttgttcatct
aaggaagctgttatggtggcgcctaagaagacgtatcgtattaaaccaatcagattttca
ggtccttgcaaatctcaacttacagtgcagattctgggaacgttaatagcttctgatgat
cgatctgacttcagcaaagacggtagacactggcttatctttgacagtgtttccaatttg
gtggttgaaggtggtggggccatcaatggcaatgggaaaaattggtggcaaaattcatgc
aaaaccgataaatctaagccctgcaaggacgcaccaatggcactcaccttctgtaagagc
aagaatttgatggtgaggaacctgacaattcaagatggacaacaaattcatgtgtctttc
cagaaatgcatgaatgttgaagtttccaatctctcaataactgcaccaccaaaaagcccc
aacaccgacggaattcatgttacagatactcaaaacatattgatcacaagctgtgttata
gccacaggtgatgattgtctttctattgtaaatggatccaaaacggtgcaagcttcgaac
ataacctgcggatcaggccatggtatcagtattggaagcctgggatctggaaactcaaaa
gcgtatgtttcggatattacagtgaatggagcaaaactttatggaactacaaatggaatt
cgaatcaaaacgtggcagggagggtcaggaagtgcaagcaacatcagatttcagaacatt
gaaatgcataatgttaccaaccccatacttatagaccaatattactgtgacagaaagata
ccgtgcaaagaacagagatcagcagttgaagtcaaaaatgtggtgtacaaaaacatcaaa
ggaacaagtgcttcagatgttgctataaaattcgattgcagcaagagcttcccttgtctg
gggattatgttgcaagatattaacctccaacacgaaggaaggaaaacagctaaagctctg
tgcaacaatgttaatgtgactagcataggggttgtttgcccgctttgtcctaaattagaa
gggcaatatgagacttgccaatgtctatga
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