Malus sylvestris (European crab apple): 126594349
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Entry
126594349 CDS
T09027
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126594349
09124 Replication and repair
03420 Nucleotide excision repair
126594349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126594349
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126594349
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126594349
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126594349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
126594349
NCBI-ProteinID:
XP_050116574
LinkDB
All DBs
Position
12:complement(26494593..26526557)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAVKGLFISCDIPMAQFIINYDNSLPASQRFIIHVLDSTHLFVQPHAAEMIRSAIAEF
RDQNSYEKPT
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgctgttaaaggactgttcatctcttgtgacatacctatggcgcaattcatc
atcaattacgacaattcactgccagcttcacagaggttcataatacatgtcttggatagc
actcacctttttgtgcagccccatgctgccgagatgataagaagcgccattgctgaattt
agagaccagaattcatatgagaagccgacttga
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