Malus sylvestris (European crab apple): 126594359
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Entry
126594359 CDS
T09027
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126594359
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126594359
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126594359
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126594359
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126594359
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126594359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
Malt_amylase_C
Sos7
TMF_TATA_bd
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
126594359
NCBI-ProteinID:
XP_050116607
LinkDB
All DBs
Position
12:complement(5205834..5261310)
Genome browser
AA seq
1334 aa
AA seq
DB search
MHVPLSNLAGSSRGMEAQVEQTNAFEDPQKMKFTWTIENFTRLDNKNHYSDIFVVGGFKW
RIIMFPKGNQVDALSMYLDAADSGTLPYGWRRFAHFSLAVVNQIDTKYSVEKDTQHQFNA
RESDWGFTSFMPLGDLYDPSRGYLVSDTVVVEAKVTVRKVLNYQSYDSKKETGYVGLENQ
RQSGYMNSLLQTIYHIPYFRKAVHHMPTTENDMPSGSIPLTLKRLFYKLQYSDSIVSTKE
LTKSFGWDTHYLFMKHDVHEFNKFLSQKLEDKMKGTVVEGTILQLFEGHYMNYTDCINVH
YKSERKESFYDLQLDVKGCRDVYDSFDKYVTVEHLEGDNKYRAGQYGLQVAKKGVLFIDF
PPVLQLQLKRFEYDFVRDTVVKVNDRYEFPIQLDLDRENGMYLSPESDRSVRNLYTLHSV
LVHIGGAHDGRYCAFIRPTLSDQWYKFDNERVTKEDVKRALEEQYGGEKELPRTNSHFNR
TSFSLTKYSNAYMLVYIRESDKEKIMCNVDEKDIAEHLRIRSKKGQEKKEVERCNAQAHL
YTTIKVSRDNDLAEQIGRDVYFGLVDHNKVHRFRILNLTPFNLFKKEVANEFGIPVQFQR
FWIWSMRKNHTYRPKRPLTSCEESKAVGRLRDGSNTIHNGELKLFLEVEFGPDLCLIPPP
AKTKKDILVFFKLYEPEKRELHFVGRLFVKSCSRPVEILAKLNQLAGFSPDEEIELYPEI
SSEPCIMWEQLDKKIPFRFSQIQDGDIICFQKSTPHGSEVCKYPNVPSFFKYLHYRQIVR
FRSLEKPNEDDFSLELSKLHTYDDVVENLARLIGLENATKIRLTAHNCLSQQPRPRPIKY
QGAEHLTEMLTHYNHSSDILYYEVLDIPLPELERLGLKTLKIAFHHATKDEVGIYSIILP
KQSNVGDVINVLKTKVELSHPNAELRLLEVFDHKIYKIFSNSEKFENINDQYWTIRGEEI
PEEEKNLGLDDILIHVYHFTKVTVLNQTVEQVKNFGKPFVLVIHGGETLAEVKIRIQNKL
QVPDEEFSKWKFAFLSLGRPEYLRDSDIVSSRFQRRDVYGAWEQYLGLEHSDKAPKRAHA
ANQAAQETLESMASNVGNVTASREMQNGDLDGPASPAVDRTLRRLSAAEDLLKSTSAREP
SVETLAALDTVSRYARSSLDTLSTNGAYEEFKAAVKLLTEQGMIHSTITSMLKDLLSSLE
GEMPKYVAAVKELAQAENFAVEHEDIKVKMGLAMQICQERKDIVANYDAKVTELEAELAR
VNAQLAQVKTERAEAMANLETAVDEMEPHKQRFADSSLKSENLIVRQATLTLQNCGSVGI
WAVLQDVLKKYFKF
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgccgctttcgaatttggctggaagctctcggggcatggaagctcaagtggag
cagactaatgcatttgaggatcctcaaaagatgaaattcacttggacaattgagaacttt
actaggttggacaacaagaaccactactctgacatcttcgttgttggcggctttaaatgg
cggataataatgtttcccaagggaaaccaagtggacgcgttatcaatgtatttggatgca
gcagattctgggacattgccatatgggtggagaagatttgcgcactttagcttggctgta
gttaatcagatcgataccaagtactcagtagaaaaggacacacaacaccagttcaatgca
agagaaagtgactggggattcacttcattcatgcctcttggtgatctttatgacccaagt
aggggatatctggtgagcgatacagttgtggttgaagcgaaagttactgtccgtaaggtt
cttaactaccagtcatatgactcaaaaaaggaaactggttatgttgggcttgagaatcag
cggcaaagtggttatatgaattctctactccagacgatttaccatataccatactttaga
aaggctgttcatcatatgccaacaactgagaatgacatgccttcaggaagcatccctttg
acactaaaacgtttattctataagcttcaatacagtgacagcattgtttcaactaaagaa
ttgaccaagtcttttgggtgggatacacattatttgtttatgaaacatgacgtccatgaa
tttaataaatttcttagtcaaaagcttgaagataaaatgaagggaactgttgtggagggt
acaatactgcagttatttgaaggacattacatgaactacactgactgcatcaatgtgcac
tacaaatctgaaagaaaagagtcattttatgacctccagcttgatgtcaaaggctgtcgg
gatgtctatgattctttcgataagtatgtgacagttgaacatcttgagggtgacaataaa
taccgtgcgggacaatatggtttgcaggttgctaagaagggtgttctgtttattgacttc
cctcctgttcttcaacttcagctaaagcgatttgagtatgattttgtgcgggacactgtg
gttaaggtaaatgatcgctatgaatttcctattcaacttgaccttgatagggagaatgga
atgtacctatcacctgaatcagataggagtgtccgcaacctctacactcttcatagtgtc
ttggttcatattggtggggcgcatgatggacgttactgtgctttcataaggccaaccctc
tctgaccagtggtacaagtttgacaatgaacgtgtgacgaaagaggatgtgaaaagggct
ttagaagagcagtatggtggtgagaaagagttaccacggaccaattctcactttaatcgt
acttccttcagccttacaaaatactcaaatgcatacatgcttgtgtatatacgggaaagt
gataaggagaaaataatgtgtaacgtggatgagaaagacatagccgaacatctaaggata
aggtcgaagaaaggacaagaaaagaaagaggttgaaagatgtaatgcacaagcacacctc
tacactactattaaggtttctcgagataacgacctggcagaacaaattggaagggatgta
tattttggccttgtcgaccataacaaagttcataggttccgtattctgaatctaacaccc
tttaatcttttcaagaaggaggttgcaaatgagtttggcataccagtgcagtttcagcgt
ttctggatttggtccatgagaaaaaaccatacatatcgccccaaacgaccattgacaagt
tgtgaagaatcaaaagcagttggacgattgagagatggatcaaatacaatacacaatgga
gagctaaagttgtttttggaagtagagttcgggccggatctatgtcttattcctccgcct
gccaaaaccaagaaagatatccttgttttctttaagctttatgaacctgagaaacgagaa
ctacattttgttggtcggctttttgtgaagagttgtagtaggccagtagagattttagca
aaattgaatcagcttgctggtttttcccctgatgaagaaattgaactctatccggaaata
agttctgagccttgtatcatgtgggagcagcttgacaagaagatcccatttcgattcagt
cagattcaagatggggatataatatgctttcagaaatctactcctcatggaagtgaagta
tgtaaatatcctaacgttccttcatttttcaaatacctacactatcgtcagattgttcgt
ttccgttcgctggagaaaccgaatgaggatgatttcagtttagaattgtcaaagcttcac
acttatgatgatgttgtggagaatttggctcgcctaattggtttggaaaatgccaccaaa
atcagactcactgcacataactgcttatctcaacaacctaggccccgacctatcaaatac
cagggagcagagcatttaacagaaatgttaactcattacaatcatagctctgatattttg
tactatgaagtcttggacattcccctgccagaattggaaaggctaggcctaaaaactcta
aaaattgcttttcatcatgctacaaaagatgaggtggggatttacagtattatattgccc
aaacagagcaatgttggggatgtgattaatgtacttaaaacgaaggtagagctgtctcat
ccaaatgcagaactccgactgcttgaggttttcgatcacaagatctacaagatcttctca
aacagtgagaaatttgagaatattaatgaccagtactggactattcgtggagaggagatt
ccagaagaagagaaaaacttgggtctcgatgatatcttgattcatgtttaccacttcacg
aaagtcactgtattgaaccagacggtagaacaagtaaaaaattttgggaaacccttcgtc
ttggtcatccatggaggggaaactttagctgaagttaaaataaggatacaaaataaattg
caagtcccggatgaggagttctcaaagtggaagtttgcattcttgtcacttggtcgtcca
gagtacctgcgggattctgacattgtttccagccgatttcagagaagagatgtttatggt
gcatgggagcagtaccttgggttggagcactctgataaagctcctaagagggctcacgca
gcaaatcaagctgcccaagaaaccttagagtccatggcgtctaatgtcggcaatgttaca
gctagcagagaaatgcaaaatggtgacctggatggccctgcttctccagcagttgatcga
actctgagaagactttctgctgcagaggatctattgaagtccacttcagccagagaacca
tcagtagagactttggctgcattagacactgtgagccgctatgcaaggagcagcctagac
actctcagcacgaatggggcatatgaggagttcaaagcagccgtgaaactcttgactgaa
caagggatgatccattcaacgatcacttccatgctcaaggatcttctttcgtctttggag
ggtgaaatgccgaagtatgtggctgcagtaaaagagcttgcccaagctgaaaattttgca
gtcgaacacgaagatataaaagttaaaatgggactggccatgcagatatgccaagagaga
aaagacattgtggccaattatgatgccaaggttacagaacttgaggctgaactggcgcga
gttaatgcccaactggcgcaagtaaagacggaacgagctgaggcaatggcgaatctagaa
actgccgtggatgaaatggaacctcataagcagaggtttgcagatagctctttaaaatct
gaaaacttgatcgtgaggcaggctaccttgacattacaaaattgtggctctgttggaatc
tgggccgtcctacaagatgtgctgaagaagtactttaagttttag
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integrated database retrieval system
