Malus sylvestris (European crab apple): 126594480
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Entry
126594480 CDS
T09027
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126594480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126594480
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126594480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
126594480
NCBI-ProteinID:
XP_050116778
LinkDB
All DBs
Position
12:28174392..28178720
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AA seq
293 aa
AA seq
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MSSRSSRTIYVGNLPGDIRMREVEDLFLKYGPIVDIDLKIPPRPPGYAFVEYEDPRDADD
AIYGRDGYDFDGFRLRVELAHGGRHSSSHRSSSYSRSSSSRGASRRSDYRVLVTGLPPAA
SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYEDMKYAIRKLDDSEFRNAFARSYI
RVREYDSRHSYSRSPGYDYRRSYSRSPSRSPYLSRSPSVSRSYSYGGRSRSISPEATYSR
RSPSVSYRRSVSRSRSRSRTVSRSPNYIPHRRSLSRSRSRSRSVSRSPSPSAW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgatcgagtcgcactatctacgtcggcaatctgcctggagatattcgtatg
agagaagttgaagatttgttcctgaagtatgggcctattgttgacattgatctcaaaatc
cctccaagaccgcctggttatgcttttgttgagtatgaagatcctcgtgatgctgatgat
gcaatttatggccgggatgggtacgactttgatgggtttcgtttacgggttgaactagca
catggtggacggcactcctcgtcacatcgttccagcagttacagtcgtagtagcagcagc
cgtggtgcttctcggcgctctgactatcgtgtgctggtcactggattgcctcctgctgct
tcgtggcaggatctgaaagatcacatgcgccgagctggcgatgtctgcttttctcaagtg
ttccgtgatcgtggtggcatgacgggaattgtagattacacaaactacgaggatatgaaa
tatgctatcagaaaacttgatgactctgaattcagaaatgcctttgctcgctcttacata
cgggtgagggagtatgattctaggcatagctattccagaagccctggttatgactataga
cggagctactctagaagccccagtcgttctccatatttgtcaagaagtccaagtgtcagc
cgcagctatagctatgggggccggagcagaagcatatcaccggaggcaacatattcacgc
cgctctccatcagtatcttaccgaaggtctgtctcacgttcccgctcaagatctcggacg
gtatctaggtctccaaattatattcctcaccgcaggtctctgagcagatcgaggtcaagg
tccagaagcgtatctcggtctccttcaccttctgcttggtga
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