KEGG   Malus sylvestris (European crab apple): 126594539
Entry
126594539         CDS       T09027                                 
Name
(RefSeq) cyclin-H1-1
  KO
K06634  cyclin H
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03022  Basal transcription factors
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    126594539
  09124 Replication and repair
   03420 Nucleotide excision repair
    126594539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126594539
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126594539
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     126594539
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     126594539
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 126594539
NCBI-ProteinID: XP_050116854
LinkDB
Position
12:complement(28785931..28789412)
AA seq 328 aa
MADFQSSTHRARWIFTPEELVGKYKAANQRAVQTLEKYGATLMEVDVDGTLSYPKPQVNA
DSRPKPINIEEEQFMRVFYENKLQEVCTNFHFPHKVQATALIYFKRFYLHWSVMLHHPKN
IMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQTLEFDLIVYAPYRSIEGF
VNDMEEFCGLEDNQLQHLKDAAKMEVDKIMLTDAPLLFPPGQLALAALRSANHVCRVADF
ERYLSSILSRQSSAHTISELVEFLNAIDSWAKRYKFPSDKDLKHINRKLKSCWGLSTHDE
SKKRDKKSKHKSKRSSNEAQILPSRAQM
NT seq 987 nt   +upstreamnt  +downstreamnt
atggccgatttccagagctcgactcaccgagccaggtggatcttcactcccgaagaactg
gttggtaaatacaaggctgctaatcaaagagcagtgcaaacattggagaagtatggagca
acactaatggaagtagatgtagatggaacattatcataccctaaaccccaagtaaatgct
gattcccgtccaaaacccattaacattgaagaggagcaatttatgcgagtattttatgag
aataaacttcaagaagtgtgtaccaactttcattttccgcataaagttcaggcaacggct
ctcatatatttcaagaggttttatctacactggtcggtgatgctacatcatccaaaaaat
ataatgttaacctgtatatatgcagcttgtaaaatagaggaaaaccacgtatcagcggag
gagcttggtaaggggatctcacaggatcatcaaatgatactcaataatgagatgatagtt
tatcagactttggaatttgatcttatcgtttatgcaccgtaccgctcaattgaaggattt
gtcaatgatatggaggaattctgcggattagaggataaccagctccaacatctcaaggat
gcggcaaagatggaagttgataaaatcatgctcacagatgcaccactccttttccctccg
gggcagttggcattggctgcattgcgtagtgcaaatcatgtatgcagagtcgctgacttt
gagagatacctgagtagcattctctctcggcagagttctgcgcataccatttcagagcta
gtcgaattcctcaatgcaatcgattcttgggcaaaaagatacaagtttccttcagacaag
gatctcaagcacatcaaccggaaactgaaatcttgttggggacttagtacacatgacgag
agcaagaagcgggataagaaatcaaagcacaagtcaaagaggagttcaaatgaagcacaa
attctaccatctcgtgctcaaatgtaa

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