Malus sylvestris (European crab apple): 126594539
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Entry
126594539 CDS
T09027
Name
(RefSeq) cyclin-H1-1
KO
K06634
cyclin H
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126594539
09124 Replication and repair
03420 Nucleotide excision repair
126594539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126594539
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126594539
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126594539
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126594539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
126594539
NCBI-ProteinID:
XP_050116854
LinkDB
All DBs
Position
12:complement(28785931..28789412)
Genome browser
AA seq
328 aa
AA seq
DB search
MADFQSSTHRARWIFTPEELVGKYKAANQRAVQTLEKYGATLMEVDVDGTLSYPKPQVNA
DSRPKPINIEEEQFMRVFYENKLQEVCTNFHFPHKVQATALIYFKRFYLHWSVMLHHPKN
IMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQTLEFDLIVYAPYRSIEGF
VNDMEEFCGLEDNQLQHLKDAAKMEVDKIMLTDAPLLFPPGQLALAALRSANHVCRVADF
ERYLSSILSRQSSAHTISELVEFLNAIDSWAKRYKFPSDKDLKHINRKLKSCWGLSTHDE
SKKRDKKSKHKSKRSSNEAQILPSRAQM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttccagagctcgactcaccgagccaggtggatcttcactcccgaagaactg
gttggtaaatacaaggctgctaatcaaagagcagtgcaaacattggagaagtatggagca
acactaatggaagtagatgtagatggaacattatcataccctaaaccccaagtaaatgct
gattcccgtccaaaacccattaacattgaagaggagcaatttatgcgagtattttatgag
aataaacttcaagaagtgtgtaccaactttcattttccgcataaagttcaggcaacggct
ctcatatatttcaagaggttttatctacactggtcggtgatgctacatcatccaaaaaat
ataatgttaacctgtatatatgcagcttgtaaaatagaggaaaaccacgtatcagcggag
gagcttggtaaggggatctcacaggatcatcaaatgatactcaataatgagatgatagtt
tatcagactttggaatttgatcttatcgtttatgcaccgtaccgctcaattgaaggattt
gtcaatgatatggaggaattctgcggattagaggataaccagctccaacatctcaaggat
gcggcaaagatggaagttgataaaatcatgctcacagatgcaccactccttttccctccg
gggcagttggcattggctgcattgcgtagtgcaaatcatgtatgcagagtcgctgacttt
gagagatacctgagtagcattctctctcggcagagttctgcgcataccatttcagagcta
gtcgaattcctcaatgcaatcgattcttgggcaaaaagatacaagtttccttcagacaag
gatctcaagcacatcaaccggaaactgaaatcttgttggggacttagtacacatgacgag
agcaagaagcgggataagaaatcaaagcacaagtcaaagaggagttcaaatgaagcacaa
attctaccatctcgtgctcaaatgtaa
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integrated database retrieval system