Malus sylvestris (European crab apple): 126594553
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Entry
126594553 CDS
T09027
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126594553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126594553
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126594553
Prokaryotic type
Archaeal type
TFB
126594553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_LysW
Zn_ribbon_8
Zn_ribbon_6
DmmA-like_C
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
126594553
NCBI-ProteinID:
XP_050116876
LinkDB
All DBs
Position
12:complement(8601081..8614868)
Genome browser
AA seq
312 aa
AA seq
DB search
MSDAYCPDCKRQTEVVSDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMTNQAVKAAQEAVTKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLHPHVSKIIPGWY
ATEDALKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgtattgccccgactgcaagcgccagacggaggtcgtgtctgaccactcg
gccggcgacaccgtatgctccgagtgcggcctagtgctggaatcccattccatcgacgag
acctcggagtggcgtaccttcgccaacgagtcgggcgataacgacccggtccgtgttggc
ggccctaccaaccccttgttggccgatggcgggctgtccactgtcatagccaagcctaat
ggggcttctggtgagttcttgtcttcgtccttgggtcggtggcagaaccgtgggtctaat
ccggatcggggcttgatactggccttcaaaaccattgctaccatgtctgataggttgggc
cttgttgcaaccatcaaggatcgggctaatgagatatataaaagggtggaagatcagaaa
tctagtagaggaagaaatcaggatgcactattggctgcttgcctgtacattgcttgtcga
caagaagataagccacgcactgtaaaggaaatttgctccgtcgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggattagagaagggtcag
tcagtggagatgggaacaatacatgctggggactttatgaggcgattctgttccaatctt
ggtatgactaatcaagcagtcaaagctgcccaagaagccgtgacaaagtcagaagaattc
gatataaggaggagccctatatcgatagcagcagcagttatttatattatcacccagctt
tcagacgacaagaagcctctcaaagatatctccgttgctactggagtagcagaaggaaca
atcagaaactcttataaagaccttcatccccatgtgtcaaagattatacctggctggtac
gcaacggaggatgctctcaagaacctttgcagcccttga
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