Malus sylvestris (European crab apple): 126594602
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Entry
126594602 CDS
T09027
Name
(RefSeq) coatomer subunit beta'-3-like
KO
K17302
coatomer subunit beta'
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126594602
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126594602
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
126594602
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
126594602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_DCAF12
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
126594602
NCBI-ProteinID:
XP_050116940
LinkDB
All DBs
Position
2:3863201..3873253
Genome browser
AA seq
912 aa
AA seq
DB search
MPLRLDIKRKFVQRTERVKSLDLHPSEPWILASLYSGTVYIFNYQSQSTAKSFEVSDLPV
RSAKFIVRKQWVVAGADDMFLRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHTHYVMQVTFNPKDTNTFASASLDHTVKIWNLVSPDPNFT
LDAHSKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPVIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAFGYMKSSRRIVIGYDEGAIMVKIG
REVPVASMDSGGKIIWAKHNEIQTVNIKSVGADFEAIDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEFAVRETTSRIKVYSKTFQ
EKKNVRPTFSVEHIYGGVLLAMRSNDFICFYDWVECRLIRRIDVNVKNVYWADSGDLVAI
SSDSSFYILKYDRDVVSSYFDSGRPVDELGVEDAFELLYEINERVRTGLWVGDCFVYNNS
SSRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRLFLIDKEFNVIGYTLLLSLIEYKTLVI
RGDLERAKQIFPTIPPEQHNIVARFLESRGMLEDALEMATDADYKFDLAIQLGRLEIAKE
IATEAQSESKWKRLGELAMSTGKLDLAEDCLSHGMDLSGLLLFYSSLGDVQGISKLASLA
KEQGKNNVAFLCLFMLGKLEECIQLLLESGRIPEAALMARSYLPSKVSEIVSIWRNDLNK
VNKKAAESLADPQEYPNLFEDWQVSLALESKEAENRGIHPPAEQYPVYAEKPATNLVERF
RSMQIDEEAPIENGDLDHEEVQENGEDQGEGETVEEDADSTNGVVLVNGNQEEELDKDDE
ATSSPERQLEDV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctcgatatcaagcggaaatttgtgcaaagaaccgaacgagttaagtct
ttggatctacatccatctgagccatggatccttgcgagtctgtattcgggaactgtgtac
atcttcaattaccagtcacagagcacggcaaagtcttttgaggtctctgatttgccagtt
cggtcagcaaagtttatagtgcgtaagcagtgggtagtggctggagctgatgacatgttt
cttcgtgtatacaattataatacaatggataaagttaaagtctttgaagcacactcggac
tacattagatgtgtggctgtccatccaacacttccatatgttttgtcatcatctgatgac
atgcttatcaaactgtgggattgggaaaaaggttggatttgtactcagatatttgaaggg
catacacactatgtgatgcaagtgacctttaaccctaaagacaccaacacttttgcaagt
gcttccttggatcacactgtaaagatctggaaccttgtctctcctgacccaaattttaca
ttggatgctcactcgaaaggagtaaattgtgttgactacttcactggcggtgataaacca
tacttaatcactggctcagatgatcatacagcaaaggtgtgggactatcagacaaaaagt
tgtgtgcagacactcgatgggcatactcacaatgtgtctgcagtttgctttcatccggaa
cttccagttataattactggttcagaggatggaactgttagaatatggcactcaaccact
tatcgtcttgaaaacacattgaattatggacttgaacgtgtttgggcctttgggtacatg
aaaagttcacgccggattgtaattggttatgatgaaggagccataatggtaaaaattggt
cgagaagtaccagttgctagcatggatagtggtggaaaaattatttgggcaaagcataac
gaaattcaaactgtgaatatcaaaagcgttggagcagattttgaggctatagatggagaa
agattgcctctggccgtgaaggagttgggaacctgtgacctttatcctcaaagtttgaag
cacaaccccaatggaaggtttgtcgttgtttgtggagatggcgagtacataatatacaca
gctttagcatggagaaatagatcctttggctcagcattggaatttgtatggtcaacggat
ggagaatttgctgttagggaaactacatcaaggataaaagtttatagcaaaacattccag
gaaaagaagaatgttcgaccaacattttctgtagaacatatttatggaggggtcttactg
gcaatgcgttcaaatgacttcatatgcttctatgactgggtggaatgcagattgattaga
cgtattgatgtcaatgttaagaatgtttattgggctgatagcggcgatttggtggcaatc
tcgagtgattcatcattctacattctaaaatacgatagggatgtagtctcatcatatttt
gacagtggaaggcctgttgatgaactaggtgtagaggatgcttttgagctcctctatgaa
ataaatgagcgtgtcagaactggattgtgggttggggactgtttcgtctacaataactct
tcttcgcgacttaactattgcgttggtggtgaggtaaccacaatgtttcaccttgaccgg
cccatgtacttgctgggatatcttgccaatcaaagtcgtctttttctaattgataaagag
tttaatgtcattggatacaccttgcttctcagcttgatcgagtacaaaacacttgttata
cgtggagatttggagcgtgcgaaacaaatctttccaacaattcctcctgagcaacataat
attgtggctcgatttttggaatctcgaggtatgttggaggatgcactggaaatggctaca
gatgctgactacaaatttgatcttgctatacagctgggtagacttgagattgcaaaggaa
attgctacagaagcccaaagtgaatccaaatggaagcggctgggagaattagctatgtcc
actgggaagcttgatttggctgaagattgtctatcacatggaatggacctttctggcttg
ttgcttttctattcttcccttggagatgttcaaggaatatcaaaacttgcatcccttgcc
aaagagcaaggaaagaataatgttgcattcctgtgtttatttatgctgggtaaattggaa
gaatgcatacagctgttgctggaaagtggacggatacctgaagcagctttgatggcacga
tcgtacctaccaagcaaggtttcagagatagtttcaatttggagaaatgacctgaacaag
gtcaataaaaaagctgcagaatcattggccgatccgcaagagtatcctaatttgtttgag
gactggcaggtttctcttgcccttgagtctaaagaagcagaaaatagaggcattcatcct
cctgctgaacaatacccagtctatgctgagaagccagccaccaacctagtggaaaggttc
agaagcatgcagattgatgaagaagccccaattgaaaatggagatctggatcatgaggag
gtgcaggagaatggagaagatcaaggtgaaggagagactgttgaggaggatgctgactcc
acgaacggtgttgttcttgtaaatggaaaccaggaagaagagttggataaagatgatgag
gcaacttcatcccccgaaaggcaattggaggatgtgtga
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integrated database retrieval system
