Malus sylvestris (European crab apple): 126595107
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Entry
126595107 CDS
T09027
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126595107
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126595107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
126595107
NCBI-ProteinID:
XP_050117412
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Position
13:10677783..10682164
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AA seq
714 aa
AA seq
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MMFCIIVLYRGGSTGMEMYNVPEHANDEVYMIQNMEQNLHFPSSFEQVEGTYNEGAPEFV
VDQGMYYPAATSYGYYCTGFESPGEFEDHRRIFGVDGPDIQYTGAQNESLPFVYYTPSYG
YAQSPYNPYNPYIPGAMIGADGQQYTIPPYQNSVSSPSYIPFVVQQDPIPNSSPDSLFDN
GASVNRPDGRGVKYNLNSASGGYPNSSKSSLNQMNPLTKVSEGQRGNGSSKHAVTHGGVS
SGRFPTPASSHVNQVRSASGSVSSVDNLPNGKVLPNHLNVEIPVTNGLSNFGSSAQGRGA
AGKFRPKFHVGRALNDVHGGLEALGEQNCGPRINRLKNQLAVKAYTTKAGDCDAQGNIII
RTDKYNKDDLPVDYADAKFFVIKSYSEDDVHKSVKYNVWSSTPHGNKKLNSAYEDAQRIA
AGKHRACPIFLFFSVNASGQFCGVAEMDGPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVP
NTSFRHIVLENNENKPVTNSRDTQEIMHKKGLEMLKIFKNHTLKTSLLDDFMYYEDRQKI
MQEERGRLLLRSFESPFLVPGLGPPRKLHNSVGELPRIKEEKVTKLNDDVNNAKKTLVST
PEQVSSNSSVINASIKNEDAERKATEAKDDVVSTLKIDSLTITPKQAGSKSSAAAVTNTG
KVDVVTVGSMPVRVNGYSESLGNLTVGTIPLDPRALQLEKGGSIIKNAAHPQEK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgttctgtatcattgtattgtataggggtggcagtactggaatggaaatgtataat
gttcccgaacatgcgaatgatgaggtttatatgattcaaaacatggaacaaaacctgcat
tttccaagttcctttgaacaagttgaaggtacgtacaacgaaggagctcctgagtttgtt
gttgaccagggcatgtattatcccgctgccacaagctatgggtattactgtacaggattt
gaatcacccggtgaatttgaggaccaccgtaggatttttggcgttgatggtccagatatc
cagtacacgggtgcacagaatgaaagtttgccttttgtatattatacacctagctatgga
tatgcacagtctccatacaacccatacaatccttacatacctggtgctatgataggcgct
gatggccaacagtataccatccccccttatcagaactctgtctcttcaccttcctacatc
ccttttgttgttcaacaagatcccattcccaacagttcacctgactccttgtttgataat
ggagcatcggttaatagacccgatggaagaggggtcaaatataacttaaattcagcttct
ggaggctaccctaactcctcgaagtcctctttaaatcagatgaatcccttgacaaaggta
tcagaaggtcaaagaggtaatggatcaagcaagcatgctgtgacacatggaggtgtttct
tctggtcgttttccaaccccagcctcgtcacatgttaatcaggttagaagtgcatctggg
tcggtttcgtctgtggataaccttccaaatgggaaagtattgcctaatcatttgaatgtg
gaaatccccgtcactaatggcttatctaactttggatctagtgctcaaggaaggggtgct
gcgggtaagtttcgaccaaaatttcatgttggtagggccttgaatgacgtacatggtggc
ctggaggcattgggtgagcagaattgtggtcctagaatcaacaggttaaaaaatcaacta
gccgtgaaagcctatacgaccaaggcaggagattgtgatgcacaaggaaacatcattatc
cgtactgataaatataacaaggatgatctgcccgttgactacgcagatgcaaagtttttt
gtaataaaatcatacagcgaggatgatgttcacaaaagcgtcaaatacaatgtctggtca
tccacaccccatggcaacaagaaactaaatagtgcatatgaagatgctcaaagaatagct
gcaggaaaacatagagcctgtcctatcttccttttcttttccgttaatgcaagtggtcaa
ttctgtggcgtagcggagatggatggcccggttgactttcacaaggatatggacttttgg
cagcaagataaatggagtgggagcttccctgttaagtggcacatcattaaagatgttcca
aataccagtttcaggcacattgtattggagaacaatgaaaacaagccagtgactaatagc
agggatacacaagagattatgcataagaaaggcttggagatgctgaaaatattcaagaat
cacacattgaagacatctttacttgatgactttatgtactatgaggaccgtcagaaaatc
atgcaggaagagagaggcaggttacttcttagaagctttgaaagtccatttttagtacct
gggctgggtcctccccgcaagctgcacaactctgtgggtgagctgcctcgtattaaggaa
gaaaaagtcaccaaacttaatgatgatgtgaacaacgcgaaaaagactttggtctctact
cctgagcaggtttcctctaactcaagtgttatcaacgcgagtatcaagaatgaagatgct
gagcgcaaggcaactgaagcaaaagatgatgtcgtgtctaccttaaaaattgattccctc
actattactccaaagcaggcaggatcaaaatcttcagctgccgctgttactaacaccgga
aaggttgatgttgtcactgtaggttcaatgcccgtaagagttaacgggtattctgaatcc
ttgggtaatttaacagttggaacaatccctctggatcctagagcgttacagctagagaag
ggcgggtctatcataaaaaatgcagctcatcctcaagagaaatga
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