Malus sylvestris (European crab apple): 126595330
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Entry
126595330 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126595330
KO
K10895
fanconi anemia group I protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
126595330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126595330
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
126595330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
126595330
NCBI-ProteinID:
XP_050117617
LinkDB
All DBs
Position
13:complement(12611483..12618290)
Genome browser
AA seq
1409 aa
AA seq
DB search
MNTTATISTREQQSPPPLSDTDIIRVAQSCSPIPTYLLSTASHPTLLSYLTARAQSTSPS
RPVSDYTVSLLSLIALSPQFDSLSTLLSSLLRSYTQIFTSFGIPHDANSLKTIQFFHPLL
PHVPITDLPQIVEPIVSFFPQIVDLEDAQILDLLPRCLNLIRNAEEIERGGHFVNSVIDK
ILEVNWSKGLVIKMVSIVRDFPVLDKTRAREFVDKVFVGMSRLDLQDLPSIVYQLLVLAS
KGFVKREVVEGIVMFFGSKMASKATSIVRQVEGTVLLHVNFAVKQDPTLGQEVMGLVRSD
LRAFNHFTVAVLLSVSRVRKFGESSMGALKVALLTAYRDYKFAKDCKWIPNDMKEEHLQN
VKIVEKAILRAVNESNCGREHIVPSILQLAFLLLESADEGSRQEACNLSGLLGIEELAVQ
MLRTLFEAHDMARNEIIEQCKFRILSLKPEQSMAIIRLLGSLVQIYPYPMLEHVSRLKEL
LDYFAFMHGKVAAHLVSVLLPLLKFSRDLQNYTILVMRKAMFRREDAIRLAATGAVIDLI
LAEKQSKRDDTLLFQESSSQASSSQQSEMRYSVGGCLFQELSGLLQRCLYQQANVKEVMY
HGLMKLVLVDPSSGGAVFDFLLPHFLHFYKEDEDVHLRINCCVKSESGKVYIEEPLDCLL
SCISWMLLLQPHGKTEHLENSWACLGFSLSQENEAGRNLSGDSFYTAFLKIRKSLRNQSL
EGIFGQSQDSGSSSFEEDKRKCCAFVLSGIIEVVLNAIATELEKSTDRKKLDLEKELIEF
VDLHDSLDKDAGISKQSTTIRRGNPRTTAHDMTNNTDSGQSKVTQGRVSFFATSSIYQIL
QTVLKLLNTDNSDNVATSQNHSQLTSKTTKCSAKMICFVLNASLNHIKSSSVLQNEDPLR
TLIYGELKMLGPPLLKLIILLKSGPKMSDQKKKEAKGKKDVHGQRDHLHLALICLKELIM
ICSSTSHLTGLLEDMVSISTLQHADSNNESETILIIDDQHLRSKELFIVKTLKPLFSELL
ALSFFSEVEIISDMIMIIGCKLPCELSNSHGAWAVSVCKSNEILSSKVGKSIVRLAICLS
SPPDDLIISQDLARELLQVIGSEGNEPVKVSEAYPVINHLTSAVLNSCVLHTIEEVIADM
DWATKKLKTFSLVYQKMVHFSQNNEQSSELAFEENLYPRAGAVVKVLSSFVSMNLNDTQA
EILLRLAARFYKHLAQMSKLRIAPKGCKQIFPSLKFQKLVEVTCKQLTNPLYVFVDIMQK
KQQENANKKGIINKIKRENRCIPDLIYQIEDYEKYLIQLSKVCKVNLLKHAKRSTARDFR
IFPKENATPSDEANHANSNAVENESAEDLNANDNEGDDDDRLEKILSAESNSPMVAEDSG
SENEEVDGLPSPKRLKRNNRVVEDSDDEA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccgcaaccatatccaccagggaacaacaatcaccacccccactatcggac
accgatatcatccgagtagcccagtcctgctccccaatccccacctaccttctctccaca
gcgtcccacccaaccctcctctcttacctcacagcccgcgctcaatccacttcgccgtcg
aggccagtctccgactacaccgtctctctcctctccctcatcgctctgtctccccaattc
gattctctctctaccctcctctcctctctcctccgatcctacacccaaatcttcacctcc
ttcggaatcccacacgacgccaactccctcaaaaccatccaattcttccaccccctcttg
ccccacgtacccatcaccgatcttccccaaatagtcgaacccattgtgtcattttttccc
caaatcgtcgatttggaggatgcccaaatccttgaccttcttccccggtgcttgaacttg
attcgcaacgctgaggagattgaacgcggcgggcattttgtcaattcggtgattgataag
attctggaggttaattggtcaaaagggttggtgatcaagatggtttcgattgtcagggac
tttccggttctagataaaacgagggctagggagtttgtagacaaggtgtttgtgggaatg
tcaaggttagacttgcaggacttgccgtcgattgtgtaccagctgctggttttggcgtct
aaagggtttgttaagagagaggtagttgaagggattgtgatgtttttcgggtcgaaaatg
gcgtcaaaggcaacctctattgttagacaggttgaagggactgtgttgcttcatgtgaac
tttgcagtaaagcaggatcctacactaggacaagaggtgatgggacttgtgaggtcggat
cttagagctttcaatcactttacagttgcggttttgttgtcggtttcgagggttcggaag
tttggtgagagctcgatgggggctttgaaagttgcgctgcttaccgcgtaccgtgattac
aagtttgctaaagattgtaagtggatacctaatgacatgaaggaagaacatctgcagaat
gtcaaaatagtggaaaaggccatattaagagctgttaatgagagcaactgtggaagagaa
catattgtgccgagcattttgcagcttgcgtttttattgctagagtcagcggatgaggga
agtcgtcaagaggcttgcaatctaagtggtttgttaggcattgaggagcttgctgttcag
atgctgagaactctatttgaggcccatgacatggcaaggaatgagattatcgagcagtgt
aaatttcgcatcctttctttaaagccagagcagagcatggcaatcataagactgcttggt
agtctggttcaaatttatccataccccatgctagaacatgtttcccgtctgaaggaattg
ttggattattttgctttcatgcatggcaaggttgctgctcatcttgtttctgttttatta
cctctcttgaagttcagccgcgatcttcagaattacacaattttggtaatgcgtaaggcg
atgtttagacgagaagatgcgattcgtcttgcagcaactggtgctgtcattgacctaatt
ctagcagaaaagcaatccaagagagatgacacattactatttcaagagtcatctagccaa
gccagtagcagccagcaatctgagatgcgctacagtgtggggggatgcctttttcaagag
cttagtggtttgctacagagatgtctttatcagcaggcaaatgtcaaagaagtcatgtat
catggacttatgaagcttgtgttggtggacccgtcaagtggtggagctgtctttgatttt
ctgttacctcacttcctccacttctataaggaggatgaagacgttcacctacgaatcaac
tgctgtgttaaatcagagagtggcaaggtttatatagaagagcccttagattgtcttctg
tcttgtatctcttggatgctacttctacaaccgcatggtaaaactgagcacttggaaaat
tcatgggcatgtttgggtttctccctttcacaagaaaacgaggcaggaagaaatttgtca
ggtgattcgttctatactgctttcttgaagatacggaagtcgttaagaaatcagagtttg
gaaggcatctttggtcaatctcaggattctggttcttcatcttttgaagaggacaaaaga
aaatgctgtgcatttgttttatcaggaattattgaagtagtcttgaatgctattgctact
gagttggagaaatcaacagacagaaagaagttggatttggaaaaggagcttattgagttt
gttgaccttcatgattcattggataaggatgcaggtatctccaagcagagtacaactatc
agaagagggaatcctcgcactactgctcacgatatgaccaacaacacggattcaggccaa
tcaaaagtgacacaaggacgagtatctttctttgcaacttcaagtatatatcagatcttg
caaacagtattgaaactactcaatactgataattctgataatgttgcgacttcccaaaac
catagccagttgactagcaaaacaacaaaatgctctgctaagatgatttgttttgtgttg
aatgcatccctcaatcatataaaatcttcctctgttctgcaaaatgaagatccattgaga
actttgatctatggggaacttaagatgctaggaccccccttgctgaagttgatcattttg
ctcaaatcggggccaaagatgtcagatcaaaagaaaaaggaagctaaaggaaagaaagat
gttcatggacaaagggaccatcttcatctagccttgatttgcttgaaggagttgataatg
atttgttcatcaacttcacacttgactggtttgcttgaggatatggtgtcaatctccact
cttcagcatgctgattcaaataatgaaagtgaaacaatcttgataattgacgatcaacat
ttacgaagcaaagaactgttcattgtcaaaaccttgaagcctctattttctgagcttctg
gcactttcatttttcagtgaagttgagatcatctctgacatgataatgatcatcgggtgc
aaattgccatgtgaactgagtaactcccatggagcttgggctgttagtgtttgcaagagc
aatgaaatattaagctccaaggtcggaaaaagcattgtgaggcttgctatatgtttaagc
tccccaccagatgatttaattatatctcaagatctggctagagagctgttacaagttatt
ggatcagagggaaatgaacctgtgaaggtgtctgaagcgtacccggtcataaaccatctg
acaagcgccgtattaaattcttgtgtactgcacacaattgaagaagttatagctgatatg
gattgggccaccaaaaagttgaagacattctctttagtctatcaaaaaatggttcatttc
agtcagaacaacgagcaatcttctgagttggcatttgaggaaaatctttaccctagggcg
ggagcagtggtgaaagtactatcatcctttgtttcaatgaacctcaatgatactcaagct
gagatattgctgcgattggctgcgaggttttacaagcatttagctcagatgtcaaagctt
aggattgctcctaaaggttgcaaacagatctttcctagcctcaagtttcagaagcttgtg
gaagtaacctgtaaacagctgacgaacccgttgtatgtctttgtggacattatgcaaaag
aaacaacaagaaaatgctaacaaaaaggggatcatcaacaaaataaagagggagaacaga
tgcatcccagacctgatatatcagatagaagactacgaaaagtatctcatccagcttagc
aaggtgtgcaaagtgaatctattaaagcacgccaagcgaagcactgcacgcgatttcaga
atattcccgaaagagaatgccactccaagtgatgaagcaaaccatgccaactccaatgca
gttgaaaacgagtcagctgaggatctcaatgccaatgacaacgaaggagacgatgacgac
aggttggagaagattttatcagcagaatcgaatagtcctatggttgcagaggattctggc
tcggagaatgaagaagtggatggccttcctagtccaaagaggttgaagagaaacaacaga
gttgtggaggactctgatgatgaagcctaa
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